Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0815 ATGGAGGGAAGAGAAGGGATCGGTTCTGGGGTTACAGTGATAGGTGCAGAAGCTCCATCAACCTATCACATGGCACCAAGGAGTGAAGCTCCAACTCAGCAGGATCCTCTTGTTCCTGAAGCAACAAGTGGAGCTATTGGTGTCACACTCACACCAGTGAGTGTGGGATTGGATGGAACAGTTGCTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGATGAACACTATGGCATTGTCACCTATGCCAATCTCATCTTCAGCTCCATTTGCTAATGATTTTTCATCTGGGAAGCGGGGTAAGCCGCGGGGGATGGAGTATAAGCCGCTGAAGAAAGTTGGAGTGGATCTTTTTGGTGACTCTATTGGTACAAACTTTATGCCCCATATCATTACGGTCAATACTGGCGAGGACATTACAATGAAGGTTATATCTTTTTCCCAACAAGGACCACGTGCAATATGCATCCTATCTGCTAGTGGTGTAATTTCAAATGTTACACTTCGTCAGCCCGATTCTTCTGGTGGAACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCATTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCCGGTCCGGTGGTATGAGCGTTTCGTTGTCGAGTCCAGATGGTCGCGTTGTAGGTGGTGGAGTTGCTGGTCTCCTTGTAGCTGCCAGTCCTGTCCAGGTGGTGGTGGGAAGCTTTTTGCCAAACAACCAGCAAGATCAGAAACCAAAGAAGCCAAAGTCTGATTATGCACCGGCTAATGCCACCCCTGCTGCCATTGCAGTGTCTTCTGCACCACCCCCTACCAATGGTGAAAAGGAGGATGTCATAGCCATGGGTGGACACCTACTGCACAACTCAGGAACAACCACCCTTAACTCAAACCTCACTCCTCCCTCGGCCTTCCGTCGAGAAAATTGGGTTAACATGCACTCCATGACAGACTCGATGAAGTCGGCTACTGACATTAACATATCTCTTCCCGACAGTCTTGCTGACAATATTCATGACTGA 1047 0.4814 MEGREGIGSGVTVIGAEAPSTYHMAPRSEAPTQQDPLVPEATSGAIGVTLTPVSVGLDGTVAKKKRGRPRKYGPDGMNTMALSPMPISSSAPFANDFSSGKRGKPRGMEYKPLKKVGVDLFGDSIGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFLPNNQQDQKPKKPKSDYAPANATPAAIAVSSAPPPTNGEKEDVIAMGGHLLHNSGTTTLNSNLTPPSAFRRENWVNMHSMTDSMKSATDINISLPDSLADNIHD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0815 348 ProSiteProfiles PPC domain profile profile. 126 267 IPR005175 -
Aed3g0815 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 340 IPR039605 GO:0003680
Aed3g0815 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 244 IPR005175 -
Aed3g0815 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 248 - -
Aed3g0815 348 Gene3D - 131 261 - -
Aed3g0815 348 MobiDBLite consensus disorder prediction 245 264 - -
Aed3g0815 348 CDD DUF296 131 221 IPR005175 -
Aed3g0815 348 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0815 Aed-Chr3 5831243 5836450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0815 10 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.860 2.40e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0815 - - gmx:100777213 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0815 3 5831243 5836450 Aed3g0815 3 5831243 5836450 ECH
Aed3g0815 3 5831243 5836450 Aed2g0866 2 6636803 6642524 PCT