Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0809 ATGGCGTCGAACCGTAACGGCGTTCAAAGAGGAAGCGCCAAGTTCGACCGCCCACTCAAGCCCCGCCCCCGCCCCTCCTCCCCCTCGCCGGGATCCGCCCTTCGCCGCCCCAGCCATGCCGCCCGAAACGGTGACGCCGTACCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCACGGAATGCTGAAGAAATGATGGCGGATGCTGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGTCGAAACAATTGGGATTCAGACACTTATGAGTTTGATGAGGTGCTTACCGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGTCAAACTGGGACTGGGAAAACTTTTACACTTGGACGCCTGGGGGAAGTAGACGCCTCTGACCGTGGTATCATGGTTCGTTCCATGGAGGATATTTTTGCTGACTTATCACCAAATACCGATTCTGTCACTGTCTCTTATGTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTGAATCCAGCAAATGATAATATTCCTATAGTGGAAGACCCAAGAAGTGGTGATGTATCTATGCCTGGGGCAACTCTTGTAGAAATCACAGACCAACATAGTTTTTTGGAGTTGTTAAGGGTAGGGGAAGCTAACCGAGTAGCTGCTAACACAAAATTGAATACTGAATCTTCTCGCAGTCATGCTATTCTAACGGTTCATGTTAAGAGGTCTGTCTTGGAAAATGAAGATATTGTGTCTAGTCAAAATGGTGATGCCTCTCATTTGACTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCAGGTTCAGAACGTGTCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGGATGCTTCGAGATTCTTTTGGAGGCACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCTCCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTCGGCCAGAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAAGAATTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTACAATTAGATAAGCTTATTGCAGAAAATGAAAGACAGCAGAAAGCTTTTGAGGATGAAGTTGAAAAAGTAAATTTGGAGGCACAATGTCGTATTGTTGAGGTTGAGAGGAACTTTGCAGATGCGTTAGAGAAAGAGAGACTGAAATGCCAGATGGAGTACATGGAATTGGTAAAGGAGCTGGAGCAGAAGTTGGTGTTGAATCAAGAAAGACATGGTTACAATAGTTTTGTGGCTGATAATGGAGAGGGGCCTGCATCATCTTCTGCAGATGAAGTAGCTGAGGGCAAAATGCTGCTTGAAACTGAAAGAAATCGGAGGAAGGCAGCTGAAGAAGAGGTAGACCATCTAAAAAGTCAGCCATGGAAACATACGCAAACAGAGGCTGGAGGAGATGTGGAGATTATAAAGCTTCGGAACATCCTGGAGGATGAGGCTAATCAGAAAAAAAGACTTGAAGAAGAAATCATAATACTAAGGAGTCAATTATTGCAATTGAACTTTGAAGCCGATCAGATGAGAAGGTGTTTAGAAAATGGAAGCTCTGGGAGCACAATTTCTGCCATGGATTCCTCCACGACTCAAGTTAGGCATTCCCAATTCAAGGACACTGCGAATGGTCAAAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTACAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCCGTGAAAGTGGTGGCCAACCTAGCAGCTGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGTGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATATGAGGATGAAACTGTTCGCAGAGTTGCTGCTGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAATCAAGAACTTATTATGGCTGAAGGAGGAATTACTCTGCTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGAGCAATTGCCAACCTATGTGGAAATGATAGAATATTGATGACTCTGAGATCTCAGGGAGGTATAAAAGCTTTACTGGGAATTGTAAGATGTGGACATCCTGATGTTCTTTCCCAAGTTGCACGAGGAATTGCTAACTTTGCAAAATGCGAGTCTAGAGCTTCTAATCAAGGGATAAAAAGTGGCAGATCCTTTTTGATAGAAGATGGTGCACTTCCGTGGATAGTTCAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACATTGAGCTTGCGCTCTGTCACTTGGCACAGCATGAAGTGAATGCAAAGGACCTGATTAGTGGTGGTGCTCTTTGGGAGCTTGTCCGAATTTCACGAGATTGCTCACGAGAGGACATCCGAAATCTTGCTCGTCGGACTCTGAGTTCTGTCTCAACATTCAAATCTGAATTGCGGCGATTGCGTATAGATTATTAA 2670 0.4393 MASNRNGVQRGSAKFDRPLKPRPRPSSPSPGSALRRPSHAARNGDAVPGRVRVAVRLRPRNAEEMMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEVDASDRGIMVRSMEDIFADLSPNTDSVTVSYVQLYMETLQDLLNPANDNIPIVEDPRSGDVSMPGATLVEITDQHSFLELLRVGEANRVAANTKLNTESSRSHAILTVHVKRSVLENEDIVSSQNGDASHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKVNLEAQCRIVEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERHGYNSFVADNGEGPASSSADEVAEGKMLLETERNRRKAAEEEVDHLKSQPWKHTQTEAGGDVEIIKLRNILEDEANQKKRLEEEIIILRSQLLQLNFEADQMRRCLENGSSGSTISAMDSSTTQVRHSQFKDTANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDLISGGALWELVRISRDCSREDIRNLARRTLSSVSTFKSELRRLRIDY 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0809 889 MobiDBLite consensus disorder prediction 1 47 - -
Aed3g0809 889 CDD KISc 50 390 - -
Aed3g0809 889 Pfam Armadillo/beta-catenin-like repeat 664 701 IPR000225 GO:0005515
Aed3g0809 889 Gene3D - 614 721 IPR011989 -
Aed3g0809 889 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 631 673 IPR000225 GO:0005515
Aed3g0809 889 Gene3D - 722 886 IPR011989 -
Aed3g0809 889 SUPERFAMILY ARM repeat 622 882 IPR016024 -
Aed3g0809 889 SMART kinesin_4 48 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g0809 889 Coils Coil 408 439 - -
Aed3g0809 889 Coils Coil 547 581 - -
Aed3g0809 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 427 IPR027417 -
Aed3g0809 889 MobiDBLite consensus disorder prediction 517 538 - -
Aed3g0809 889 Gene3D Kinesin motor domain 43 422 IPR036961 -
Aed3g0809 889 SMART arm_5 703 744 IPR000225 GO:0005515
Aed3g0809 889 SMART arm_5 745 785 IPR000225 GO:0005515
Aed3g0809 889 SMART arm_5 835 877 IPR000225 GO:0005515
Aed3g0809 889 SMART arm_5 621 660 IPR000225 GO:0005515
Aed3g0809 889 SMART arm_5 661 702 IPR000225 GO:0005515
Aed3g0809 889 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed3g0809 889 Coils Coil 505 532 - -
Aed3g0809 889 ProSiteProfiles Kinesin motor domain profile. 50 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g0809 889 Pfam Kinesin motor domain 56 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g0809 889 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g0809 889 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g0809 889 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g0809 889 MobiDBLite consensus disorder prediction 517 534 - -
Aed3g0809 889 Coils Coil 452 472 - -
Aed3g0809 889 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 672 715 IPR000225 GO:0005515
Aed3g0809 889 PANTHER KINESIN-RELATED 32 881 IPR027640 GO:0003777|GO:0007018
Aed3g0809 889 PANTHER KINESIN-LIKE PROTEIN 32 881 IPR033291 GO:0008017|GO:0032886|GO:0048364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0809 Aed-Chr3 5761223 5774303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0809 47 439 Calmodulin-binding Proteins AT5G65930 34.390 3.37e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0809 - K10396 gmx:100789455 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0809 3 5761223 5774303 Aed3g0809 3 5761223 5774303 ECH