Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0790 ATGAAAACCTATGATCGATACCGGAATTACTCTTTACGACAAGATGACAATGTTCAACCTGAAAATCAGGACTGGTACCAAAAAATCTCAAAGCTAAATGCTAAGTATGAAGCTCTTCAAAGGACACAAAGGCATTTGCATGGGGAAGATCTTGGACCTCTGAACATAAAAGAGTTGCAAATTCTTGAGAACCAACTTGAAAAGGCTTTATCACAAGCTAGGCAGAGGAAGACACAAGTTATGATTGAACAATTGGAAGAGCTTCGCAGAAAGTTCTCATTCATCTTGCAGGAACACCATCTTGGAGACCTGAACAAGGACCTTACGCTCAAGCCTCATTTTCAGCTTGAACCTTATGAATTTAATCTCAAAGCTAATGGAAGTTTGTGGGGCTCTACCTCTGCTGCTGCTGAAGATGGGAACTTTCCCTTGCAAAATTCTCAAAACAACACTATGGATTTACAAGCTGCACCTTTCTTGCAAATAGGGTACCCTGTTCAAGGTGAGCCATCCATTGTCCCAAAGAGCATGACTAATTTTCAGGAATGGTTCCTTTGA 558 0.4086 MKTYDRYRNYSLRQDDNVQPENQDWYQKISKLNAKYEALQRTQRHLHGEDLGPLNIKELQILENQLEKALSQARQRKTQVMIEQLEELRRKFSFILQEHHLGDLNKDLTLKPHFQLEPYEFNLKANGSLWGSTSAAAEDGNFPLQNSQNNTMDLQAAPFLQIGYPVQGEPSIVPKSMTNFQEWFL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0790 185 ProSiteProfiles K-box domain profile. 22 120 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed3g0790 185 Coils Coil 22 42 - -
Aed3g0790 185 PANTHER MADS-BOX TRANSCRIPTION FACTOR 17 16 170 - -
Aed3g0790 185 Coils Coil 56 83 - -
Aed3g0790 185 PANTHER MADS BOX PROTEIN 16 170 - -
Aed3g0790 185 Pfam K-box region 19 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0790 Aed-Chr3 5582404 5584196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0790 1 185 MADS-box Gene Family AT2G45650 47.000 4.96e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0790 K09264 - gmx:100813753 226.868