Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0774 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGAACTTCCATTTCATCAGATCCTGGAGGGGATTGTACCACAAAAAGAGCAAGGTTTGATCTGGAGACTGGAGTAAAGGTCAATGAGGAAACATATCATAATGTAGATGCATCAAAAGAAAGTGTTAGTTCCAATGCTCCTGTAGTGGCTAGTACTGAGAAGTCAGGTTATGATCAGCTTCCAAAAGAATTAAATGAAATGAAAATTGAAGACGGCAAAAACAACAATGAGAAGGATATGGAAGCAAGTATTGTGAATGGTAATGGAACAGAAACAGGTCAAATAATTACAACTGCTGTTGGTGGTCGAGATGGACAACCAAAGCGGACAATCTCATACATGGCAGAACGTGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGTGAAGCAGTTGCAATAAAAAAAGTGTTGCAAGACAGGAGATATAAGAATAGGGAACTGCAGGTTATGCGTATGCTTGACCATACTAATGTTCTCAAACTTAAGCACTGTTTCTATTCAACGGCCGAGAAAGATGACTTATACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTATAGGGTTTCAAAGCACTATGTCAGAATGCACCAATATATGCCTATCCTTAATGTGCAACTGTACACATACCAGATATGCCGGGGCTTAAATTATTTGCATCATGTGATTGGAGTTTGTCATCGGGACATCAAGCCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAAGTATGTGATTTTGGGAGTGCAAAGATATTGCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAGTTGGTAGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCATAAGGTTTTTCCCAAGAAGATGCCTTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCAAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATGATCTGCGAGAACCAAATGCATGCTTGCCAAACGGGCAACCACTGCCTCCTTTGTTCGACTTCACTGCTCAAGAATTGGCGGGTGCACCTGAAGAGTTGCGTCGACGCCTCATTCCCCTGCATGCAAGAAGTTGA 1227 0.4181 MNMMRRLKSIASGRTSISSDPGGDCTTKRARFDLETGVKVNEETYHNVDASKESVSSNAPVVASTEKSGYDQLPKELNEMKIEDGKNNNEKDMEASIVNGNGTETGQIITTAVGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDRRYKNRELQVMRMLDHTNVLKLKHCFYSTAEKDDLYLNLVLEYVPETVYRVSKHYVRMHQYMPILNVQLYTYQICRGLNYLHHVIGVCHRDIKPQNLLVNPQTHQLKVCDFGSAKILPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFPKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLREPNACLPNGQPLPPLFDFTAQELAGAPEELRRRLIPLHARS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0774 408 ProSitePatterns Protein kinases ATP-binding region signature. 132 156 IPR017441 GO:0005524
Aed3g0774 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Aed3g0774 408 ProSiteProfiles Protein kinase domain profile. 126 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0774 408 Gene3D Phosphorylase Kinase; domain 1 111 205 - -
Aed3g0774 408 MobiDBLite consensus disorder prediction 1 25 - -
Aed3g0774 408 CDD STKc_GSK3 121 366 IPR039192 -
Aed3g0774 408 PANTHER SHAGGY-LIKE KINASE 278 408 - -
Aed3g0774 408 PANTHER SHAGGY-LIKE KINASE 9 277 - -
Aed3g0774 408 SUPERFAMILY Protein kinase-like (PK-like) 125 388 IPR011009 -
Aed3g0774 408 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 9 277 - -
Aed3g0774 408 Pfam Protein kinase domain 126 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0774 408 MobiDBLite consensus disorder prediction 9 23 - -
Aed3g0774 408 SMART serkin_6 126 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0774 408 Gene3D Transferase(Phosphotransferase) domain 1 278 407 - -
Aed3g0774 408 Gene3D Transferase(Phosphotransferase) domain 1 206 277 - -
Aed3g0774 408 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 278 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0774 Aed-Chr3 5472649 5477001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0774 132 371 Core Cell Cycle Gene Families AT1G76540 29.097 8.15e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aed3g0774 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0774 K00924 - gmx:100786458 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0774 3 5472649 5477001 Aed3g0774 3 5472649 5477001 ECH