Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0751 ATGTTGGGTTCAGGTACTAATTTGGTGACCACGATCATTGGATTTGGGATGAGTGCCACTTTCATTGTGTTTGTCTGCACCAGAATCATTTGTGGAAGGTTAAGAGGGGGTGTTGAATCTCGGATGATGTATGAGATTGAATCAAGAATTGATATAGAACAACCAGAACATCATGTTAATGACCCTGAATCCGATACTGTTCTGCTTGATGCAATCCCTACTTTGAAGTTCAACCAAGAGGCTTTCAGTTCCCTTGAACACACACAGTGTGTAATATGTTTGGCAGACTACAAAGAAAGAGAAGTATTGCGCATCATGCCAAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGAAAACAATCTACTTGTCCAGTATGTCGTCTTCCATTGAAGAACTCATCCGAAACAAAACATGTGAGACCTGTGACATTTATCATGAGCCAGTCCCTTGATGAGTCTCACACATCAGAAACAACTGAAGATACTGAGAGACATGTTGATGAACCTACAATGCCTACTGCAGCCAATAACTCTTTAGAACCAACTTCAAGAGAACAAGAAGCAAGACAATGA 588 0.4048 MLGSGTNLVTTIIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDIEQPEHHVNDPESDTVLLDAIPTLKFNQEAFSSLEHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFIMSQSLDESHTSETTEDTERHVDEPTMPTAANNSLEPTSREQEARQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0751 195 MobiDBLite consensus disorder prediction 159 173 - -
Aed3g0751 195 PANTHER OS02G0676500 PROTEIN 1 176 - -
Aed3g0751 195 SUPERFAMILY RING/U-box 80 139 - -
Aed3g0751 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 142 IPR013083 -
Aed3g0751 195 SMART ring_2 90 131 IPR001841 -
Aed3g0751 195 CDD RING-H2_EL5_like 89 132 - -
Aed3g0751 195 Pfam Ring finger domain 89 132 IPR001841 -
Aed3g0751 195 PANTHER OS11G0150450 PROTEIN 1 176 - -
Aed3g0751 195 MobiDBLite consensus disorder prediction 153 195 - -
Aed3g0751 195 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0751 Aed-Chr3 5237987 5240365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0751 79 135 C3H Transcription Factor Family AT4G10160 54.386 2.88e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0751 - - gmx:100790202 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0751 3 5237987 5240365 Aed3g0751 3 5237987 5240365 ECH