Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0726 ATGAACATGGACATGGCTTGTAGTTTGCCGCAGTCAAGAATGTTGCATGGAGGAGGTGTCGGGGCGAGTTACAGACACAGATCAGTAGGTCAGTTAGGTTGCTTTGATTTTAGAGGGAGAGGTTTCGGCTGTGATTTTCTTGGCAGCTCGAGAAGTGTTTCGAGATTGCGGGGTAGTGGGATGAATGTTTCTGCATGTTTGAATAGTTCGAGAGTGGTTACTGGTAGGGAGTTTAAGGTTTTGAATATGAAGAGAGGTTTGTCTTGTAAGAATAATAATAATAATCTTTTCACGGGGTCTATAGTAATTTTGTCAAAGTGCCAGGGCAATGATTCTTTAGCTTATGTTAGTGACAATGGCCGGAATGTTGATTATGTGGAAGGTTCGGGTGAGGATGCAGGATTGGGGCCTGTTTCTAGTGCTGAAGTGGATGCACCTTTGGAAGAAGAAGGGGGGCAAGCTGAGAGGAAAGAGGGAGGGAGTGAAATAGGATTAGAAGAGCTAAGTGTAGATGAACTGAAAGAACTGTTGCAAAAGGTCTTGAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCAGTAAATTCTTGGAACAATGTTAACTCTACACTTGACACCATTCAAGAAATAGTGAATGAAGAATTTACGGCCAAAGAAGCTGTCCAAAATGCAGCAATGGCTCTTTCATTAGCTGAGGCAAGGCTTCAAGTAGCCATAGAAACTTTGGAGGCTACAAAAGAAATTCCTGATTCAGCACAAGGTTCTAATGAGAGCATTGGTGATAAGGAGACGGTGGAAGAGGAGCAAGCTCTTTTGGTGGCTCAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCAGAGCTGAGGCGCTTGCAAGATAGAAAGGAGGAGTTGCAGAAGGAAGTGAGCAAATTGCAAGACATTGCTGAAAAGGCTCAGCTGAATGCGGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTGGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACAAAACGTGTAAATGATGCAGAGATTGCCTTACAGCGAGCAGATAAGTCTAATTCTAATTCAAATGCTGATGCCATAGAAACTACACAAGCACAAGATGTTGAGGCTGTTCCTGAGGAGGAGAAAGTGGTTCAAGGTTTTTCTGGTGATGTCACTGTTGAAAGAGATAGAGATTTGGCAATTGATGATGAACCTTTGCTTCCCACATTATCACAGGAAACACTGTCTGATAAAACCAGCCAAATTTTGGAAGACAAAACACAGTCTGGCTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAGGAAACACCGAAAGATTTGACCAAAGATAGTTCACCCTTTGCTCCCAAGGCGTTGTTGAAAAAGTCATCACGATTCTTTTCTGCATCATTCTTCTCTTTTACTGAAGAAGATGGAACTGAGTTCACACCCGCATCAGTCTTCCAGGGCCTTGTATTATCTGTACAGAAGCAGTTGCCCAAGCTGATATTTGGCTTATTGTTAATGGGAGCAGGGGTTGCCTTCTATGCTAATAGAGTGGAGAGGAATGCTCAGCTGCTTCCACAGGCAGATGTTATTATGACCAGTGTTGAAGAAGTTTCCTCTAGTACAAAGCCTCTGGTTAGACAGCTTCAGAAACTCCCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAACGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTAATATTTGTGCCAATATTTCAAAAAATCCCCGGAGGAAGTCCTGTTCTTGGCTACTTGGCTGCGGGTATTTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCACGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGTCTGGAGCTCTCTGTTGAAAGACTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGATCTGCACAGGTATTGGCAACTGCTGTAGTTGTTGGCTTGGTGGCTCATTATATTTGTGGCCAAGCTGGTCCTGCTGCTATTGTCATTGGGAATGGCCTAGCATTATCATCGACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACTTCACGGCATGGCCGAGCTACTTTTTCTGTGTTACTTTTTCAGGATCTGGCTGTCGTGGTCTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGACTGGCTGCTGTTAAGGCAGCCGTTGCCATCACTGCCATAATTGCAGGGGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATTTTCTCAGCCAATACGCTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGGGTTGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTCCCAGTCATAGCTGGCGCACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTTGTTTGATGGGTAGAATGTTTGGAGTTTCCCTCATTTCTGCCATCAGAGTTGGTCTTCTTCTTGCTCCTGGTGGGGAGTTTGCATTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCTGCCGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGTGTTGGCCAGATCATTGCCCAACTTCTTTCTGAGCGTCTTATTCCGTTTGTCGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGGCGTGCTCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTAGAGAGGTCCTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACACTTGATACGCCTGGTGCAAATTATAGAACAGTTTGGGCTTTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTCCGTGCCCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTTGCAGCTGCTGTGCTTTCTCAGGCTAAACTCCCCACGTCGGAGATTGCAGCAACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTAATAGAATTATGAGCAAACCCAAATCTCCACCCGCAGATACATTAGATGAGACCCCAGTCTCTGAAGGGACACTGGCAATATGA 3495 0.4358 MNMDMACSLPQSRMLHGGGVGASYRHRSVGQLGCFDFRGRGFGCDFLGSSRSVSRLRGSGMNVSACLNSSRVVTGREFKVLNMKRGLSCKNNNNNLFTGSIVILSKCQGNDSLAYVSDNGRNVDYVEGSGEDAGLGPVSSAEVDAPLEEEGGQAERKEGGSEIGLEELSVDELKELLQKVLKELEVAQINSTMFEEKVKKISETAISLHDEAVNSWNNVNSTLDTIQEIVNEEFTAKEAVQNAAMALSLAEARLQVAIETLEATKEIPDSAQGSNESIGDKETVEEEQALLVAQEDIKECQANLANCEAELRRLQDRKEELQKEVSKLQDIAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATKRVNDAEIALQRADKSNSNSNADAIETTQAQDVEAVPEEEKVVQGFSGDVTVERDRDLAIDDEPLLPTLSQETLSDKTSQILEDKTQSGYLSDNENAVQTKKQETPKDLTKDSSPFAPKALLKKSSRFFSASFFSFTEEDGTEFTPASVFQGLVLSVQKQLPKLIFGLLLMGAGVAFYANRVERNAQLLPQADVIMTSVEEVSSSTKPLVRQLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARVGMSIDPKLLLSNFPVIAGALGLLICGKTILVCLMGRMFGVSLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNRIMSKPKSPPADTLDETPVSEGTLAI 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0726 1164 Pfam TrkA-N domain 969 1082 IPR003148 GO:0006813
Aed3g0726 1164 Gene3D - 964 1128 - -
Aed3g0726 1164 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 842 1164 - -
Aed3g0726 1164 Coils Coil 170 190 - -
Aed3g0726 1164 ProSiteProfiles RCK N-terminal domain profile. 968 1090 IPR003148 GO:0006813
Aed3g0726 1164 MobiDBLite consensus disorder prediction 422 478 - -
Aed3g0726 1164 MobiDBLite consensus disorder prediction 1144 1164 - -
Aed3g0726 1164 MobiDBLite consensus disorder prediction 432 463 - -
Aed3g0726 1164 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 843 - -
Aed3g0726 1164 Coils Coil 290 345 - -
Aed3g0726 1164 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 965 1106 IPR036291 -
Aed3g0726 1164 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3 843 - -
Aed3g0726 1164 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 842 1164 - -
Aed3g0726 1164 Pfam Sodium/hydrogen exchanger family 609 840 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed3g0726 1164 Pfam Sodium/hydrogen exchanger family 842 936 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed3g0726 1164 Gene3D - 842 942 IPR038770 -
Aed3g0726 1164 Gene3D - 599 841 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0726 Aed-Chr3 5081663 5096586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0726 3 1164 Inorganic Solute Cotransporters AT4G00630 63.158 0.0 1353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0726 - - gmx:100798822 1900.18