Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0715 ATGAGGCAACTAACTAACTGCCGTTTCTCTTCTCTTCTCTTTGGTTACGAAGTTTGGTGCCCCAAAAGAAAAGAAACCAACGCTAATTGTGCTTCACTCCACCCACCAACGAAGAGTAGCAGAAAGTCTATTCCTTTTATCACTCCTTCCCTTTCTGCTTCACAACAAACAAATAACCATGAAGAATTTTGGGAAAGAAACAATGCAGACAATGGTGCTGAATCCATGGAAGAAGTAGATGAACTAGACGTAGTTATGCATGATAACATGAATGGGGATTATGAACCTTGCGAGCCAGCATCAGGGTTGTCATTTCCTTCCAGGGAAGCAGTTAAATCTTTTTATAGGCAGTATGCTTCTAGAATGGGATTTAGTTTCAAAACGAGAAACTCAAAAAAAGGACGTGATGGAAAGTTACATTACTTTATACTAACTTGTTCACGAGAGGGAATTCGTGTGCCAAACACTTTGAAGACATTGCCCACAATCAAGAATAATTGTGAAGCCAGAATTACAGTTTCCTTCAAAGATGGACTGTGGTACATAATGAAAACGGTACTTGACCACTCTCATGAGCTTAGCCCTACAAAGGCAATGATGCTCAGAGTAAACAAAAACTCCAGCATCCATGTGAACAGAACAATGCAAATCAATCATGAAGCAAAGGTGGTGATGAACAAGACCATCCAATCTCTTGCTCGTGACGTGGGAGGGTACACAAATTTATCATTTGTTGAAGGAGATGTAAAGAATCATGACATAATAGTTGAAGGGAAACCAAAGGAAGCTATTTTTGAGGTAGTATTTCATCGTGACAATCATGATTTTAGCTGCAAATGTTTACTGTTTGAGTTTAGAGGTATTATGTGTCGACATTCACTTATTGTATTTGCACAAGAAAGGGTGAAACAAGTGCCCTCAAAGTATATCTTGCCAAGATGGAGCAAAAATATAAAACGGAGACATTCATGTACTAAGAGTAGTTATGTTGTGACACAATTGAAGCAACAAGTGCAAAGGTATGACAATTTATGCAAGGACTTTGATGCGATTGCAGAACTTGCAGCAGAGTTTGAGGGTGTTGCTCACTTCCTCCAAAATAGCTTGCATGATTTGAAAAAGAAGGTGCAATCCATGGCTCTATCCACTCACAGGCCTTCATTCTTCTTAACTAAATAG 1179 0.391 MRQLTNCRFSSLLFGYEVWCPKRKETNANCASLHPPTKSSRKSIPFITPSLSASQQTNNHEEFWERNNADNGAESMEEVDELDVVMHDNMNGDYEPCEPASGLSFPSREAVKSFYRQYASRMGFSFKTRNSKKGRDGKLHYFILTCSREGIRVPNTLKTLPTIKNNCEARITVSFKDGLWYIMKTVLDHSHELSPTKAMMLRVNKNSSIHVNRTMQINHEAKVVMNKTIQSLARDVGGYTNLSFVEGDVKNHDIIVEGKPKEAIFEVVFHRDNHDFSCKCLLFEFRGIMCRHSLIVFAQERVKQVPSKYILPRWSKNIKRRHSCTKSSYVVTQLKQQVQRYDNLCKDFDAIAELAAEFEGVAHFLQNSLHDLKKKVQSMALSTHRPSFFLTK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0715 392 PANTHER OS03G0843700 PROTEIN 64 222 - -
Aed3g0715 392 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 252 386 IPR031052 GO:0006355
Aed3g0715 392 ProSiteProfiles Zinc finger SWIM-type profile. 265 301 IPR007527 GO:0008270
Aed3g0715 392 PANTHER OS03G0843700 PROTEIN 252 386 - -
Aed3g0715 392 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 222 IPR031052 GO:0006355
Aed3g0715 392 Pfam FAR1 DNA-binding domain 113 194 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0715 Aed-Chr3 5014892 5017862 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed3g0715 FAR1 3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0715 - - gmx:102667848 363.614