Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0711 ATGCCTCCTGATGCAACTCATTTTCGCCCTCCCTTAGAACCTCTACTTCAGTTTTCTCCCCCGTTTTCTCTACATGATCAAAAACAACGTTCTAGCCACAAATATCGCCAAGGAATGAACCTCATCACCAAAAAGAAACTCATCCCTATCCTTCTTTTGATCCTTTCAATCATATCAATACTAAGGCTTCTGAGCCTCATTCTCCGCACTGATCCATCTGCTATGTCTCCACCTAATTATAATACTTCTCCACTTTTTTCCACTCACAACAAAGTTGCATCACATGCACCTGAGTCCTCAAATCATCCTAGTCTAATGGAAAAAGAGTTCAAAGTTCTCTCAAACCTCGTTGCTCTTAAGTCCCCATGCAACCTTCTCATATTTGGGTTCCAGCCACAGTACCTTACCCTCTCTTCAATGAATGCAGCTGGAATCACCATCTTTCTTTGTGATCACACTCCAAAAATTGCAAACTCCAACAACACTAGAACATACCAACTTGGTTATAACGTTCCATCTAAAAAGGCTTTTAATCTTCTCAAACATGCAAGGCAGAACCAAGATTGTGCACCAAACCCAACACTACTTCAGAAATCAAAATGCAAGCTTGCATTGAGAAATTTACCATCACAAGTGTATGAGAAGAAGTGGGATATCATTGTGGTGGATGGACCCAAAGGGGATTCTCCAGAATCACCGGGTAGGATCGGTTCTAGTTACACTGCAAGTGTTCTAGCTAGAGTTGGGAATGTTTCTGAAGTAGTAGTGCATGATGTGGATCGTATGATAGAGAAATGGTTCTCATGGGAGTTTCTCTGCCATGAGAATTTGTTGTATTCTAAAGGGAAATTGTGGCAATTCAGGATCAGAGTATCCACATTAAGTCACATACATGTTGCATCCCTCGCATTTCGTTGCATCTACGCAAGAGATACAACGGGTCTGACTACAGAAAATACGGATTTGAAGTTTAGGTTACAAGCCATGGAACGACAAGCTAACTTATGTGATGCTCTAAATGATGCACTGAAGAAAGAAGTTGATAGTCTCAGGATGGCAACTGGAGATATAGTAATGCATTCCGATACCTACGGTTTGGGAATGCATCCACTTACACATTCTCACACTCCGTTCTTCTCACATCAGTCACAACATGGACAGAGTGAACTTCAGGCCATGCAAATGCCGCAGCTACATCCACTTTCATCTAATGTGTTTACTTCCCATGAGCCTCTGTTTGATCTGGACATTCCCTATGATTTGTCAGAAATATTGTCAAGTGAATCTATCGGCCAATTTCAGGGGCTGGACATAGGCCACGGGGTTTCTCATAATCTGATGCAAGATTGTCCCTCCATTCCTGTTAATAAAATCAACAATTCTTTTTTATGCAAATTTGACTGA 1404 0.4138 MPPDATHFRPPLEPLLQFSPPFSLHDQKQRSSHKYRQGMNLITKKKLIPILLLILSIISILRLLSLILRTDPSAMSPPNYNTSPLFSTHNKVASHAPESSNHPSLMEKEFKVLSNLVALKSPCNLLIFGFQPQYLTLSSMNAAGITIFLCDHTPKIANSNNTRTYQLGYNVPSKKAFNLLKHARQNQDCAPNPTLLQKSKCKLALRNLPSQVYEKKWDIIVVDGPKGDSPESPGRIGSSYTASVLARVGNVSEVVVHDVDRMIEKWFSWEFLCHENLLYSKGKLWQFRIRVSTLSHIHVASLAFRCIYARDTTGLTTENTDLKFRLQAMERQANLCDALNDALKKEVDSLRMATGDIVMHSDTYGLGMHPLTHSHTPFFSHQSQHGQSELQAMQMPQLHPLSSNVFTSHEPLFDLDIPYDLSEILSSESIGQFQGLDIGHGVSHNLMQDCPSIPVNKINNSFLCKFD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0711 467 Pfam Polysaccharide biosynthesis 109 287 IPR021148 -
Aed3g0711 467 PANTHER GLUCURONOXYLAN 4-O-METHYLTRANSFERASE-LIKE PROTEIN (DUF579) 1 291 - -
Aed3g0711 467 PANTHER OS11G0490100 PROTEIN 1 291 IPR006514 GO:0045492
Aed3g0711 467 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 95 290 IPR006514 GO:0045492
Aed3g0711 467 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0711 Aed-Chr3 4993228 4997936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0711 284 438 bZIP Transcription Factor Family AT2G40620 34.483 8.42e-18 83.2