Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0709 ATGGGTGGTGGTTTACAGGTTTTGAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTATGGCATCTGCTTGTGGGAAATATATTGCTGTGATATGCCATATCCTGACCTGAGTTTCTCAGAGATTACTTCAGCCGTCGTTCGCCAGAATCTGAGACCAGAAATACCAAGATGTTGCCCAAGTTCTATATCAAATGTGATGAAGCGATGCTGGGATGCCAATCCTGATAAACGGCCCGAAATGGACGAGGTAGTTTCCATGATAGAGGCTATTGACACATCCAAAGGTGGAGGTATGATCCCTGTTGATCAGCAGCAGGGTTGTTTTTGCTTCCGTAAGAACAGAGGACCTTGA 360 0.45 MGGGLQVLNGNPYNRKCDVYSYGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSISNVMKRCWDANPDKRPEMDEVVSMIEAIDTSKGGGMIPVDQQQGCFCFRKNRGP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0709 119 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 6 113 - -
Aed3g0709 119 Pfam Protein tyrosine and serine/threonine kinase 7 89 IPR001245 GO:0004672|GO:0006468
Aed3g0709 119 SUPERFAMILY Protein kinase-like (PK-like) 7 90 IPR011009 -
Aed3g0709 119 Gene3D Transferase(Phosphotransferase) domain 1 5 110 - -
Aed3g0709 119 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0709 119 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 6 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0709 Aed-Chr3 4981781 4982255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0709 6 119 MAP Kinase Kinase Kinase AT4G14780 71.930 2.14e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed3g0709 PK_Tyr_Ser-Thr 1.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0709 - - nsy:104236083 245.358