Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0631 ATGAAAGCCCTACTTAAAGCAAATGTAAGATGTGGGTGTAGCAAATTGAAATCCTCTGAAGTACACGAACCCACCCCAAAACCCAAAATCTCCATTTACCAAAACACAAACCTTAGCAGCCTCAATTCATCCACCACTTCAAGCGACCATGACAACGATAACGAAATCTTCACTTCCACCACCATCTCTGAACCCGACACAAATCAGCACAACAAAAACAATATGTCAAAACCTAGTCGAAAACTGGTTGACAGCATCGTCATAGAGACAGAGTCAAACGACCCACATAAGGATTTCCGAGCTTCCATGCTCCAAATGATCCTGGAGAGAGAGATCTACACAGAAACTGATCTCCAAGAACTTCTTGAGTGCTTCCTCCAACTGAATGTCACGTGTCACCACCATGTCATTGTCCAAGCCTTCATTGAGATTTGTGAAGAAGTGTTCCCGAAAAAGAACATCATCAGCGGTGGCAGTGGCGCTCCAATTGGTCAACAATGTCGCAGGAATTAA 513 0.4386 MKALLKANVRCGCSKLKSSEVHEPTPKPKISIYQNTNLSSLNSSTTSSDHDNDNEIFTSTTISEPDTNQHNKNNMSKPSRKLVDSIVIETESNDPHKDFRASMLQMILEREIYTETDLQELLECFLQLNVTCHHHVIVQAFIEICEEVFPKKNIISGGSGAPIGQQCRRN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0631 170 Pfam Transcriptional repressor, ovate 92 149 IPR006458 -
Aed3g0631 170 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Aed3g0631 170 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 2 162 - -
Aed3g0631 170 MobiDBLite consensus disorder prediction 41 79 - -
Aed3g0631 170 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 2 162 IPR038933 GO:0045892
Aed3g0631 170 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 88 146 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0631 Aed-Chr3 4486215 4486727 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed3g0631 Ovate 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0631 - - gmx:102670259 253.447