Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0624 ATGGCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAGGATCAGTCAGGATGTATGTGGGGATTTATTAGTATATTTGATTTTCGTCATGCCCGCTTTACTCGGAAGTTGATTGCAGATAAGAGGCATGGCAGCAAGTATGCTTTTGGTGCTGCATTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATGAAGAATATGAAGGCAATTTTGACAGAGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGATAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGATCATTGACCATGATGAAATAAAGGATCAAGGTAATGCTGAAGCAGAATCAAAGAAATCCAGATTAGGGCGTGAAGACCCCCCAAAGACAGATTCCAAAAGAAAAAAGAAATCTCGCAAGAAAAGCCGTGATATGGATAGCAATGATTTGAATTCAGATGCAACCTTGAAATCTGAATTTTCAAATAAACAGCATTCAAGACAACAGTCAAAAGATAATGTAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGAATGACAATGAAGGCAAAACTGATGCACAGTCAAACCAAAAGCATGTTATCTCTGAAAACCTTGCTAATGCAATCCATGAATTCACAAATCAGATGAGATTGAATGGGAAAGATCTGCCTGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTTCTTAGACTTCTACAAGACCCAAATTCACACTTATTGAAATACATTCAGGAGTTAGAAAATGCTCAAGGGAGAGGTGGCAAAGAATGCAGTTCAGTTTCCAGTTCCAACTGCTCTGAACAAGAACTTGTTAATCTGAAACAAACTAGGGAGATTGCCAACCGCAAGCATCGTAACTTTTTCAGGAAAAGGGTGAAGTCTCAATCAAAAGATCCAACAAATGAAAATGGGAAAACTGAGCTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACAACAGACATGCAAATTTCTGAAAGTGGAGACAACCTTGCCTCATCACTAGACTCTCATGATATCGCCCAGTACAAAGGTCCTTCAGTGAGAGTTGGTTCACATTTTTCTCTTACAGAGATAAAAAGGAAATTGAAACATGCTATGGGAAAGGAGAGGCATGGAAACCCTGAAGTGATCTCACACAAACTCCCTGTTGTACGTCAAAATAAGGTGCCAAGAGGCAAATGCAAAGATAATGCTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAAATTGCAAGACCTATGTTTGATGTTGTGAAAGGAAACAAGGCTGGTAAATTGAAAGACTCTGAATTGAATGTGGAACATGAAGGTGGTATTCCCAATCAAAGTGTTTCTAACATATATATTGAGGCTAGGAAACATCTGTGTGAGATGCTAGATAATGCTGATGAGAACACAAACATTTCAAGCAGGCCCAAAACCCTTGGGAGAATACTTTCTATTCCTGAGTACAGCTTTTCTCCTCTAGAAAGTCCTGGAAGGGATTTAGAGCATCATTCTGTGACTGCACAGGCAAGATTTTCTTCCTCGGACAAAACTAAGGAGGTTAGCGAGGATAACTTGTCCCCCAAACCAACAACATGTATTGGTCTTCCAGATCAGGAAACTAACAATTCAGAGAAGCAGTTAAGCATTTGTGATGAAAGCTCTAATAATAAAGTACAGGAAATTAAGTCAGTGTCGAATTTCTCCCATGATGTTGATACATCTGAAGCCTGTTATCCTGTTAGAGATGAGAATCATGAGATACTTACTGAAGGTAATGCAGAATCTACAAAAGAGAAAAATGATTTGGATTCGTCTTTGGATCCAAATGGCTTCATCACAGGAAAGGACCACAATATGGATATCTCAGAAATTGTTGATGTTGCAGGATGTTCTGAATGTTTGAATCAGGACATAACAGAAGAGAACCAACCATCATCTCTACTGTCATCTCCTCACTCTTCGATGACTAAGAAAATTGAAGATCTAGAAAATGGAACAGATGTATCCGGGCGACCGAGTCCTGTATCTGTTCTTGATACATCATTCTCGGATGATGACTTTGGCCCTGGGCACTCCAGATGTCAACCTGTTAAACTACCAGTACAACCTCTACAAATTCAATTTGAAGAACATGACTCTTCACCTGCGGAACAATTTGACAAGGGAAAATATAGTTTTGAAGAAAGTGAATTGATATATGACTACATTAAAGCTGTCTTGCATGCCTCTGGCTTGACTAGAGATCAGTTGTTGATGAAATGCCTTTCCTCAGACAAGATACTGGATCCTCCCTTGTTTGATCAGGTAGAGTTCTTCTCGAACTGGCTTTGCCACGATCAGAAGCTCCTATTTGACTCTATCAATGAAGTTCTCATGGAGATTTGTCAGCATTACTTTGGGGCCTCACCTTGGGTTTCATTTGTAAATCCTACCACGCGGCTAACTCCAAGTATGAAAAGGGTTACTTTAAAGGTCTGGGAAGGAGTGTGCTGGCATATCCTTCCCTTGCCCCCACCGCGCACTTTAGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGAACATGGATGGACCTTGGACTTGATGCTGAAACAATTGGTTTCGAAATGGGTGAGGCCATTCTTGCTGAACTGATGGAAGACACAATTTTGAGCCTTGGGAGTGAAAATTCAGAAAGTAAATGTTTATCTGCTTCAATTTGA 2796 0.3963 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKYAFGAAFTKNKFEVLSNLDEEYEGNFDRGESKRLTLTTDADKLSVKKLIEEEMIIDHDEIKDQGNAEAESKKSRLGREDPPKTDSKRKKKSRKKSRDMDSNDLNSDATLKSEFSNKQHSRQQSKDNVDLDKIMDDFCHVEAACSMMNDNEGKTDAQSNQKHVISENLANAIHEFTNQMRLNGKDLPEDGQFLSSRELMEALQVISSDKQLFLRLLQDPNSHLLKYIQELENAQGRGGKECSSVSSSNCSEQELVNLKQTREIANRKHRNFFRKRVKSQSKDPTNENGKTELSNRIVILKPALTTDMQISESGDNLASSLDSHDIAQYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVISHKLPVVRQNKVPRGKCKDNAGMRSPNKDHFFIEKIARPMFDVVKGNKAGKLKDSELNVEHEGGIPNQSVSNIYIEARKHLCEMLDNADENTNISSRPKTLGRILSIPEYSFSPLESPGRDLEHHSVTAQARFSSSDKTKEVSEDNLSPKPTTCIGLPDQETNNSEKQLSICDESSNNKVQEIKSVSNFSHDVDTSEACYPVRDENHEILTEGNAESTKEKNDLDSSLDPNGFITGKDHNMDISEIVDVAGCSECLNQDITEENQPSSLLSSPHSSMTKKIEDLENGTDVSGRPSPVSVLDTSFSDDDFGPGHSRCQPVKLPVQPLQIQFEEHDSSPAEQFDKGKYSFEESELIYDYIKAVLHASGLTRDQLLMKCLSSDKILDPPLFDQVEFFSNWLCHDQKLLFDSINEVLMEICQHYFGASPWVSFVNPTTRLTPSMKRVTLKVWEGVCWHILPLPPPRTLEQIVRKDMARRGTWMDLGLDAETIGFEMGEAILAELMEDTILSLGSENSESKCLSASI 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0624 931 MobiDBLite consensus disorder prediction 525 582 - -
Aed3g0624 931 Pfam Protein of unknown function (DUF3741) 223 267 IPR022212 -
Aed3g0624 931 MobiDBLite consensus disorder prediction 555 582 - -
Aed3g0624 931 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 931 - -
Aed3g0624 931 MobiDBLite consensus disorder prediction 106 132 - -
Aed3g0624 931 Coils Coil 293 313 - -
Aed3g0624 931 Pfam Domain of unknown function (DUF4378) 765 912 IPR025486 -
Aed3g0624 931 MobiDBLite consensus disorder prediction 106 174 - -
Aed3g0624 931 PANTHER (, RELATED) 1 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0624 Aed-Chr3 4441855 4449279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0624 1 900 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.806 1.77e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0624 - - gmx:100783243 1599.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0624 3 4441855 4449279 Aed3g0624 3 4441855 4449279 ECH
Aed3g0624 3 4441855 4449279 Aed2g0675 2 4891938 4897683 PCT