Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0620 ATGGATGAAGACAAAACCACACAACTCTCCAAAAGAATGACCAGGTCTTCAGCTTCATCTTCTGCATCTGCTTCAAATAGCCTAGCTGCAACAAAAGTAAATATCCTTGAACCTCTAAAGATCAATGACCTTTTAGTTGGAGGAGATCCCATCAGCCTTGATGACATAATTTCTAGCTTTCCTGGTAGAAGTAGCCAGATTCATGAGATTGTGCATCTTTTGGGACCTTTGAATTCACCAATGCTTCCTTTGTTCGTATATGGAAGTTCTTCTACCGGAAAAACCAGTATCATTCTTCAATTATTCAAGCATCTCAACCGACCTCTTGTTTATTCCAGTTGTAGGACATGTTATAACCAGTGTATCTTGTTTGAATCTATCCTAAATCAGCTACTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCGAATGCAAAACGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTTCGAGAAGCATTGACCGGTGTTATAAACAATCTGAAGGAGAGGTCGGAGAAGTTGATCTCAAATGAGATAATACAAGGGAAAAGTGGAAATATGATCTACTTGGTGTTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGTTCTACTATATTGCCCTTTCTGTTTAATCTCAATGATATACTAAATATGCCTGAGGTGGGTCTGATTTTTATCAGCAGTACTTCTCCAGATACCTTTTACTCTAACATGGGCTATGTAGAGCCTATCCCCATTTACTTTCCTGATTACACAGAAGACGATATCCGTAAAATATTATTGGGACACCAAGTCAACCAGAAACTATATTCCTCATTTCTGGATGTATGTCTGAAGTCTTTCTGTGGAATTACTAAGCAGGTTGGCGATTTATCTGCTGCCTTAAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAAAGGGAGTTGCTCCTAATCAGGTGATGAAGCAAAGGCTGCTCACTCATATCAAACCTCATATTGCCTCCTCTTTGAATGAGATATTTAAGGTTTCATCTCTTTCTTCAACTGAAGTTGAGACCCATAAAGAGGAAAAGTGGAAGGGAAATCCCAGGAGATTGGGGCAGTCTGAAGAACTTGGCAGTCTTGGTTTTCATATGTCTACTTGTGCAAAGTATCTTCTGATTTCAGCATACCTTGCCTCCAGAAACCCTGCAACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGGAAGAGGAAGCCTTCTGAGAAAGCGCAGGAACGGAAGGAAACTTTAGAACAGGAACTACTAATTAAAGGACCCGGAACTTTCCCATTGGAGAGGTTATTAGCCATCTTTCAATGCCTTGTATCAGTTGCAGAAGAACCATCCGACGAGGAGGCACAAAATAACAATGGATTCGAAGTTGAAGGTGGCAATGGTGGACTGATGTCTGATGTTCTTTTGCAGCTATCCAGTCTCTGCACTGCTAATTTTATATTCAAAGGAAGAACCTGTCCGATTGAAGGCTTAACCCGGTATCGATCAACCATATCTGAAGAGCTTGCTGTGCAGGTGACATCTTTGTCTCGCGTAACACTGTCAGAATTCTTTGTTATTGTTTGTGTAAGGAGATTCAAAATATGCATAAACAAAGAATAA 1665 0.397 MDEDKTTQLSKRMTRSSASSSASASNSLAATKVNILEPLKINDLLVGGDPISLDDIISSFPGRSSQIHEIVHLLGPLNSPMLPLFVYGSSSTGKTSIILQLFKHLNRPLVYSSCRTCYNQCILFESILNQLLLHRKNAANGYSNAKRCERPSDFVNFLREALTGVINNLKERSEKLISNEIIQGKSGNMIYLVFDNFQLVREWDKSSTILPFLFNLNDILNMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEDDIRKILLGHQVNQKLYSSFLDVCLKSFCGITKQVGDLSAALKPLYEKYCEPLSDKGKGVAPNQVMKQRLLTHIKPHIASSLNEIFKVSSLSSTEVETHKEEKWKGNPRRLGQSEELGSLGFHMSTCAKYLLISAYLASRNPATLDASLFDSKGGSDNRKRKRKPSEKAQERKETLEQELLIKGPGTFPLERLLAIFQCLVSVAEEPSDEEAQNNNGFEVEGGNGGLMSDVLLQLSSLCTANFIFKGRTCPIEGLTRYRSTISEELAVQVTSLSRVTLSEFFVIVCVRRFKICINKE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0620 554 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 538 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aed3g0620 554 Gene3D - 60 241 IPR027417 -
Aed3g0620 554 MobiDBLite consensus disorder prediction 410 432 - -
Aed3g0620 554 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 539 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aed3g0620 554 MobiDBLite consensus disorder prediction 1 22 - -
Aed3g0620 554 Coils Coil 159 179 - -
Aed3g0620 554 MobiDBLite consensus disorder prediction 405 432 - -
Aed3g0620 554 Pfam AAA ATPase domain 60 217 IPR041664 -
Aed3g0620 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 275 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0620 3 539 Core DNA Replication Machinery Family AT4G29910 53.704 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0620 K02607 - gmx:100782175 899.427