Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0592 ATGTCAATCTTCGATGGAGCTTTCATGAACACGGAGCTCTCCAAACACACTTCGATCTTCGGCCTCCGCCTCTGGGTCGTGATCGGAATCCTCATCGGAGTCTTCATCGTCTTCACGCTCTTCCTCCTCTCCCTCTGCCTTGTCTCTCGTCGGAACCGCCGCCGCTCCGTCGCCGGCGCCAGCTACAAGGTCGCCAGAGACGCCGAAGGGGCGAAGGACATCCACACGATCGTGCACCTTCCCGGGCCCCACATGCTCCGGCCGCCGGCGCCGGAGATCCACGTGGAGATGGGGAAGAAGACGGAGCACCGAGTGGTGGTGCAGTGCGACAGGGTTTCGAGTGAGGAGAGTAAGGTGACGGTGGGGAGTGGGTGTGAAACGACGTCGTCTTTTGGAAGTGGGAGTGTTGGTGGGCTTGGGCCCGGGCCCGGGCCTGAGGTTTCACATCTTGGATGGGGAAGATGGTACACTCTGAGGGAGCTTGAGGATGCCACAGGAGGGTTGAGTCCTGAAAATGTGGTTGGTGAAGGTGGCTATGGCATTGTCTATCATGGGGTACTCAATGATGGTACCAAAATTGCTGTCAAGAACCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTGCGACACAAAAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGAGCCTACAGGATGCTTGTGTATGAATATGTAGACAATGGAAATCTAGAACAATGGCTGCATGGGGATGTTGGAGCTGTAAGCCCTTTGACATGGAACATACGGATGAACATTATATTGGGAACTGCAAGAGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAAGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCATTGATCGCCAATGGAACTCCAAGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTGTTCTGAGAATAGTTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACTGGTATGCTGACTGAGAAGAGTGATATTTATAGCTTTGGGATCCTTATCATGGAGATAATTACTGGAAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTAATAGAATGGTTGAAGACTATGGTGGGGAATCGAAAATCCGAGGAAGTAGTTGATCCTAAGCTCCCTGAGATGCCATCTTCAAAGGCTCTTAAACGTGCTTTGTTGATTTCTCTTCGGTGTGTTGATCCCGATGCAACAAAGAGGCCAAAAATGGGACATGTGATCCACATGCTTGAAGCAGATGACCTGTTATTCCATACTGATCACAGAACTGAGGGAGAGTCTTCCCATTCATATAAAAGTGAGCATAAGGACTCAAATTTAGACAAGAGAACAACAGATGGAGGTGTCATTGATCAGAGTAAAGACGCTAGTAGTAGAAATCATGATCAGCCCACTGGATGGAGATGA 1494 0.4873 MSIFDGAFMNTELSKHTSIFGLRLWVVIGILIGVFIVFTLFLLSLCLVSRRNRRRSVAGASYKVARDAEGAKDIHTIVHLPGPHMLRPPAPEIHVEMGKKTEHRVVVQCDRVSSEESKVTVGSGCETTSSFGSGSVGGLGPGPGPEVSHLGWGRWYTLRELEDATGGLSPENVVGEGGYGIVYHGVLNDGTKIAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWNIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKTMVGNRKSEEVVDPKLPEMPSSKALKRALLISLRCVDPDATKRPKMGHVIHMLEADDLLFHTDHRTEGESSHSYKSEHKDSNLDKRTTDGGVIDQSKDASSRNHDQPTGWR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0592 497 MobiDBLite consensus disorder prediction 451 478 - -
Aed3g0592 497 SUPERFAMILY Protein kinase-like (PK-like) 148 440 IPR011009 -
Aed3g0592 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Aed3g0592 497 MobiDBLite consensus disorder prediction 479 497 - -
Aed3g0592 497 Gene3D Phosphorylase Kinase; domain 1 152 243 - -
Aed3g0592 497 MobiDBLite consensus disorder prediction 451 497 - -
Aed3g0592 497 ProSiteProfiles Protein kinase domain profile. 168 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0592 497 CDD STKc_IRAK 174 440 - -
Aed3g0592 497 PANTHER OS01G0323000 PROTEIN 1 489 - -
Aed3g0592 497 Pfam Protein kinase domain 171 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0592 497 SMART serkin_6 168 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0592 497 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 489 - -
Aed3g0592 497 Gene3D Transferase(Phosphotransferase) domain 1 244 454 - -
Aed3g0592 497 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0592 Aed-Chr3 4194531 4198606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0592 105 463 Receptor kinase-like Gene Family AT4G02010 41.287 5.78e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed3g0592 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0592 - - gmx:100817295 909.827