Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0590 ATGGCTACCGCTCCTTCGCTTCTACACTCATCTGGCTCCTCTTTTTTCTCTCAATTTCGTTCCTTTCAATTCTCTCCTCCTCCTTCTTCTTTGCTGTTTCCTCATGGAAACAGGCACGGGAATGCAGTGGTGTCCGTGAAGGCCTCTGCCTCTGGCGTTGTGTTGGTGGAGAAGTCTGAGGCAGAGAAGGCCAATAGGCTCAAAGCAGCTTACAATGAGAAAATTATTCCCTTGCTCATGGAAGAGTTCTCTTACACCAACAAACACCAGAAGATTGTGGTGAACTGTGGTATTGGAGAGGCTGCACAAAATGCAAAGGGTTTGGATGCAGCAATAAATGATCTAGCACTGATCACAGGGCAGAGACCTATTAAGACTCGAGCCAGGGCTTCTCTTGCTACCTTCAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTGACACTAAGAGGAAATATGATGTACTCATTCCTAGACCGAGTTATCAACCTGGGACTTCCTAGGACAAGAGATTTCCAAGGTGTGAACCCCAACAGCTTTGATGGGCATGGGAATTACAGCATTGGCATTAAGGACCAGGGTGTGTTCCCAGAGATCAGAGCTGATGTTGTTGGTACACCTAGGGGAATGGATATCTGCATCGTGACGACGGCTAATACTGATCAAGAAGCACAGAAATTGTTGGCTCTTATGGGCATGCCCTTCAGAGAGGGAAGTGGTCCTGCCACCTTGCTCCGGAAAAAGAAGCTCAAGTCTCATCATTTTGATCCAAAATCAAAGGGAAGAGCAAGGAAGTGA 798 0.4737 MATAPSLLHSSGSSFFSQFRSFQFSPPPSSLLFPHGNRHGNAVVSVKASASGVVLVEKSEAEKANRLKAAYNEKIIPLLMEEFSYTNKHQKIVVNCGIGEAAQNAKGLDAAINDLALITGQRPIKTRARASLATFKIREGQPLGIAVTLRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGTPRGMDICIVTTANTDQEAQKLLALMGMPFREGSGPATLLRKKKLKSHHFDPKSKGRARK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0590 265 Pfam ribosomal L5P family C-terminus 142 235 IPR031309 -
Aed3g0590 265 Gene3D - 58 237 IPR022803 -
Aed3g0590 265 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 60 237 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aed3g0590 265 SUPERFAMILY RL5-like 66 236 IPR022803 -
Aed3g0590 265 Hamap 50S ribosomal protein L5 [rplE]. 64 237 IPR020930 GO:0003735|GO:0005840|GO:0006412
Aed3g0590 265 ProSitePatterns Ribosomal protein L5 signature. 115 131 IPR020929 GO:0003735|GO:0005840|GO:0006412
Aed3g0590 265 Pfam Ribosomal protein L5 90 138 IPR031310 -
Aed3g0590 265 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 60 237 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0590 88 215 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 28.125 2.84e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0590 K02931 - gmx:100818896 444.506