Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0581 ATGGCGGAAGATTGGGATCTACATGCGGTGGTTAGAGGCTGCTCCACCGTTACATCATCCTCAGTGTCTTCCTCTTCCTCTTCTTCTGCTTCCTCTGGTTTTGCCTCTTGTTACTTTCACCCTGAACCTGTTTCTTCTTCTTGTTCTTCTTCCTCCTCTGGCTTCTCTATCTTCAAGGGTGAACAAGGAAACCATGTTTTGTCGCTTTCTGCGTACCCCTTTGAGGCAAGGAGCTCCATTGAGGAGTTGCATGAGCTTTGCAAGCCTTTCTTCTCCAAATCTCAGCCTCTCTCGCTGCAAGCCTCTTCGCCCTTGTCCTCACTCTCTTCCTATTCCTCTGCGCCACCCAAATCGGTTTCAACGCAAGAGAAACAGCAACAGAGGAGTAAGCAGCCACACGCTGTCTCCACCCCACGATCTAAAAGAAGAAAGAACCAGCTTAAAAAAGTTTGCCAAGTGCCAGTTGAGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGCCAGAAACCCATAAAGGGGTCTCCATATCCAAGGGGGTACTATAGATGTAGCAGCTCAAAGGGGTGTTTGGCAAGGAAACAAGTTGAGAGGAACAGATCAGACCCAACAATGTTTATAGTGACTTACACAGCTGAGCACAACCACCCTGCACCTACTCACAGAAACTCTCTTGCTGGCTCCACACGCCAGAAGCCATTGGCACCCCAAACTGCCACCATTGAAGAAGAAGAAGAACACTCTGAGAAGAGCAAGAGCCTCACAAAAGCCACTTCCCCTGCCACCTCAGGGTCAGAGGAAGAAGAAGCTCCAACACTACCACAAGGGGAAAAGTCTGAGAGCAGAGAAGAGAAAGAGGATGATGAGGAAGAAGATGAATTTGGGTTGTCTGATATGGTGCTTTCAGATGACTTCTTTGAAAGTTTGGATGAACTAAGTCAACTCACTGCTCCTAATGTTGTCACTGGAGACTGGTTCAGTGACCCCTTTTCAGCAATTGCAATCCCTTCTTGGGGTGCTGCTACTGCTGCTGGTGGATGCAGATGA 1050 0.4829 MAEDWDLHAVVRGCSTVTSSSVSSSSSSSASSGFASCYFHPEPVSSSCSSSSSGFSIFKGEQGNHVLSLSAYPFEARSSIEELHELCKPFFSKSQPLSLQASSPLSSLSSYSSAPPKSVSTQEKQQQRSKQPHAVSTPRSKRRKNQLKKVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLAPQTATIEEEEEHSEKSKSLTKATSPATSGSEEEEAPTLPQGEKSESREEKEDDEEEDEFGLSDMVLSDDFFESLDELSQLTAPNVVTGDWFSDPFSAIAIPSWGAATAAGGCR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0581 349 MobiDBLite consensus disorder prediction 214 302 - -
Aed3g0581 349 MobiDBLite consensus disorder prediction 255 270 - -
Aed3g0581 349 MobiDBLite consensus disorder prediction 108 134 - -
Aed3g0581 349 MobiDBLite consensus disorder prediction 108 149 - -
Aed3g0581 349 MobiDBLite consensus disorder prediction 284 299 - -
Aed3g0581 349 MobiDBLite consensus disorder prediction 217 237 - -
Aed3g0581 349 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0581 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 346 IPR044810 GO:0003700
Aed3g0581 349 Gene3D WRKY domain 143 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0581 349 MobiDBLite consensus disorder prediction 240 254 - -
Aed3g0581 349 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 346 - -
Aed3g0581 349 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0581 349 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0581 349 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0581 Aed-Chr3 4105222 4107254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0581 1 348 WRKY Transcription Factor Family AT4G01250 45.753 2.47e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g0581 WRKY 3.4e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0581 3 4105222 4107254 Aed1g2311 1 19165258 19167148 ECH
Aed3g0581 3 4105222 4107254 Aed7g0654 7 4838345 4839723 ECH
Aed3g0581 3 4105222 4107254 Aed3g0581 3 4105222 4107254 ECH
Aed2g0627 2 4535860 4538034 Aed3g0581 3 4105222 4107254 ECH
Aed3g0581 3 4105222 4107254 Aed2g0627 2 4535860 4538034 PCT