Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0577 ATGGAAAGCCAAGACCCACCAAACCCACCACCCCAGAACCAAAACAACCCTTTCCTCTTCACTCAAAACCCTTTGGACTGTGACAATATTGACTGGGGTAACATTTTCTCTGCCCAAAACAGCTTCTTGCTTAATGGGGATGCCAAAAAAGATGCTATTGATCAGTGTGCTTCTTCTTCTTCTTCTTTCGTGGCTCAAAATAATAAGGGAGCTGCTTGTGAGGATGAAAATGGAAACAACAACAAGGAGAAAAGAAAAGTGGGGAGGCTGAAGAAAACAACACGAGTGCCTAGGTTTGCGTTTCAAACAAGAAGTGTGGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAAAAAGCTGTGAAGAATAGCACATATCCAAGGTATTTATAA 402 0.4154 MESQDPPNPPPQNQNNPFLFTQNPLDCDNIDWGNIFSAQNSFLLNGDAKKDAIDQCASSSSSFVAQNNKGAACEDENGNNNKEKRKVGRLKKTTRVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRYL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0577 133 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 23 131 - -
Aed3g0577 133 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 131 IPR044810 GO:0003700
Aed3g0577 133 SMART WRKY_cls 110 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0577 133 MobiDBLite consensus disorder prediction 67 87 - -
Aed3g0577 133 SUPERFAMILY WRKY DNA-binding domain 104 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0577 133 ProSiteProfiles WRKY domain profile. 105 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0577 133 Pfam WRKY DNA -binding domain 111 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0577 133 Gene3D WRKY domain 97 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0577 Aed-Chr3 4087944 4088345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0577 83 131 WRKY Transcription Factor Family AT5G41570 63.265 1.48e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g0577 WRKY 1.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0577 - - gmx:100127398 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0577 3 4087944 4088345 Aed3g0577 3 4087944 4088345 ECH
Aed3g0577 3 4087944 4088345 Aed2g0616 2 4434036 4434419 PCT