Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0565 ATGGCTTCCCACGTTGCTCTTCTTCGTGCTCCTCCTCTTTCAATCTCCACTCAACGCTTCCATGCCAAACAGATTTGTATTAACGGACTCAAATTCACCACCACAACCACCACTTCCTCTTCTTCTTCTTTTCCATGTTCCATAGCAACACAAAGAGGGGCTTGTTCCTCGGTAATTGCATGCTCCTCTTCGAATGGCAGAGACCCAGATTCGGTGGATGATGAAGATGTACAACAACTGGAGCGGATTCTCGAAGAGAAACGACGAGCTACATTGTCTGCTAAGATTGCCTCAGGGGAATACACTGTCAAGCAGAAATCTGTTTTACTTTCAATACTGGAGGGCTTGGCAAACGTGGGGGTGTCCAATGAAGTTCTGGAATTTTTGTTTGGTTGGGTTGAAGGGGGTGACGTGCACCTCAAAATTCCTGAGGCAAAAGGGTCAATCAGAGCTATTCGAAGTGTGGCCTTTTTCATTCCCTTGTATGAACTTTACCTCACATATGGGGGGATTTTTAGGTTGACGTTTGGACCAAAGAATTTTCTAATAGTATCTGATCCCTCTATTGCAAAACACATATTGAGAGACAATTCAAAGGCTTATTCAAAGGGTATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGGCTCATCCCTGCTGATGGTGAAATATGGCGAGTTAGACGTCGTGCTATAGTCCCAGCATTACACCTGAAGTATGTAGCAGCTATGATTAGCCTTTTTGGAAAAGCTGCAGATAGGCTCTGCCAGAAGCTAGATGTTGCTGCATCCGATGGAGAAGATGTTGAGATGGAATCGCTTTTCTCTCGATTAACCTTGGACATCATTGGCAAGGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACTGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCAGTCTGGGAGATCCCAATATGGAAAGACATATCACCACGTCTAAGGAAGGTTAATGCAGCTCTCAAATTGATCAATGATACGCTTAATGATCTGATAGCAATATGCAAGAGAATGGTGGATGAAGAAGAGTTACAGTTTCATGAAGAGTACATGAATGAAAAAGATCCAAGTATTCTACACTTCTTGTTGGCGTCAGGAGATGATGTGTCAAGTAAGCAACTTCGTGATGACTTAATGACCATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCAAGGTTGACTCCGTAATTGGAGATCGATTTCCAACTATTGAAGACATGAAGAAACTCAAGTATACAACCCGAGTGATCAATGAGTCATTGAGGCTTTACCCACAACCACCTGTGCTAATTCGTCGCTCTCTTGAGGATGATGTTCTTGGAGAGTACCCTATAAAAAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGATGCTGACAAGTTTGAACCTGAAAGATGGGCATTAGATGGACCAAATCCTAATGAGACGAATCAAAACTTCAAATATCTTCCATTTGGTGGCGGACCACGGAAATGTGTAGGTGATATGTTTGCTTCATACGAGACTGTAGTAGCACTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATAGCAGTTGGAGCTCCACCGGTTGAGATGACTACTGGAGCTACAATTCATACAACACAAGGGTTGAAGATGACTGTAACACACAGAATAAAACCACCTATTGTGCCCTCATTACAGATGTCAACTTTGGAAGTGGATCCATCCATAAGCCTTTCTGATCAGGATGAAATAGGTCAGAAAGGTGAAATTTACCAGGCTCAGACTCAGTCCTAA 1887 0.425 MASHVALLRAPPLSISTQRFHAKQICINGLKFTTTTTTSSSSSFPCSIATQRGACSSVIACSSSNGRDPDSVDDEDVQQLERILEEKRRATLSAKIASGEYTVKQKSVLLSILEGLANVGVSNEVLEFLFGWVEGGDVHLKIPEAKGSIRAIRSVAFFIPLYELYLTYGGIFRLTFGPKNFLIVSDPSIAKHILRDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHLKYVAAMISLFGKAADRLCQKLDVAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLRKVNAALKLINDTLNDLIAICKRMVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSVIGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEDDVLGEYPIKRGEDIFISVWNLHRSPKLWDDADKFEPERWALDGPNPNETNQNFKYLPFGGGPRKCVGDMFASYETVVALAMLVRRFNFQIAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSISLSDQDEIGQKGEIYQAQTQS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0565 628 PRINTS P450 superfamily signature 534 545 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS P450 superfamily signature 406 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS P450 superfamily signature 525 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 Gene3D Cytochrome P450 145 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PANTHER - 142 590 - -
Aed3g0565 628 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 527 536 IPR017972 GO:0005506|GO:0016705
Aed3g0565 628 PRINTS E-class P450 group I signature 446 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS E-class P450 group I signature 534 557 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS E-class P450 group I signature 486 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS E-class P450 group I signature 165 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS E-class P450 group I signature 395 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS E-class P450 group I signature 524 534 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PRINTS E-class P450 group I signature 279 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 Pfam Cytochrome P450 163 570 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 SUPERFAMILY Cytochrome P450 155 587 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0565 628 PANTHER CYTOCHROME P450 FAMILY 4 142 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0565 Aed-Chr3 3998450 4004408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0565 66 610 Cytochrome P450 AT1G31800 77.758 0.0 875