Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0544 ATGGGAATGATAGTGGAGGTTGAAAACGAAAACGGAGACCAAAACGATGCCGTTCTGGTTCCGCCCACTAACTTCGCCATGGTCGAGGACTGCATTTTCCGATCCAGTTTACCCACCCCTTCCAATTTCCCCTTTCTCCAAACCCTAAACCTTCGCTCCATCATATATTTGTGCCCTGAGCCTTATCCCGAGGAAAATCTAGAGTTCCTTCGCTCGCAGAATATTCGCCTCTTTCAATTTGGAATTGAGGGGAAAACGGACGTTTCCATGCCTATTCTCAAGGATTCTATCATGGATGCACTGAAAATTTTAATTGATGTGAGAAATCACCCTGTTTTGATCCATTGCAAGCGAGGAAAGCATAGAACAGGTTGCCTTGTTGGTTGCTTGCGAAAATTACAGAACTGGTGTTTGTCCTCTGTGTTTGAGGAGTACCAACGATTTGCTGGTGCTAAATCCAGGACAATGGATTTAACGTTCATAGAAATGTTTGATGTTTTAAGCCTGAGTCAGTGCCTTTACAGCATCATCTACCAGTACCATGGTTCAAAGAAGCGTCGGTTGTTGTATAAAGATGGGAACCTACAGAAGCCCCGGCTGACATCGTTTTAG 612 0.4444 MGMIVEVENENGDQNDAVLVPPTNFAMVEDCIFRSSLPTPSNFPFLQTLNLRSIIYLCPEPYPEENLEFLRSQNIRLFQFGIEGKTDVSMPILKDSIMDALKILIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGAKSRTMDLTFIEMFDVLSLSQCLYSIIYQYHGSKKRRLLYKDGNLQKPRLTSF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0544 203 PRINTS Plant and fungal dual specificity phosphatase signature 92 106 IPR020428 GO:0016791
Aed3g0544 203 PRINTS Plant and fungal dual specificity phosphatase signature 19 36 IPR020428 GO:0016791
Aed3g0544 203 PRINTS Plant and fungal dual specificity phosphatase signature 75 89 IPR020428 GO:0016791
Aed3g0544 203 PRINTS Plant and fungal dual specificity phosphatase signature 56 69 IPR020428 GO:0016791
Aed3g0544 203 CDD PFA-DSP_Siw14 19 165 - -
Aed3g0544 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 187 - -
Aed3g0544 203 Gene3D Protein tyrosine phosphatase superfamily 18 168 IPR029021 -
Aed3g0544 203 Pfam Tyrosine phosphatase family 19 166 IPR004861 -
Aed3g0544 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 24 175 IPR020422 GO:0006470|GO:0008138
Aed3g0544 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 14 187 - -
Aed3g0544 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 114 124 IPR016130 GO:0016311|GO:0016791
Aed3g0544 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 166 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0544 Aed-Chr3 3863208 3866259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0544 1 199 Protein tyrosine phosphatase (PTP) family AT3G02800 66.667 6.90e-101 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0544 K18045 - gmx:100785746 398.667