Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0536 ATGGGTTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCATCCAAATTCACCATCTTCTTCATCTTTGAGGAAGAGCAAGAGCAACAACAAGAAGAGGCTTGGATCAAGGGCCTCTTCATTTGAGTATTGGAGGAATGAGCCTCTCCATAGGATCCCTGGGAGGACCTTCCTCAATGGTTCATCCCAACTTGCATCCTTGTTCACTCAACAAGGGAAGAAGGGTACCAACCAGGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGACAAGATACAGTTTTCTGTGGAGTTTTTGATGGCCACGGTCCGTATGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATTCACATTGGGAACTTAGTGCATCTGGTGAAGAAGTCCTCAAGGAGATTAGCGTTAATACTGCAGCAAGCATGAATTCAGAAGAGGCTGCATTTACATCTGCTGATGATGAATCCAGGGTATCTGTTGATATGGAGGAAACAGAAAAACACCCAGAAATCTTTCAGACACTTAAAGAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGACCCACCAAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACACTGATTAAGCAGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCACACCAAGGCGTGCCTCGGCCGCACGAGCGCTGGTTGAGTCAGCAGTCCGCTCTTGGAGGTACAAGTATCCAACCTCCAAAGTTGATGACTGTGCCGTGGTGTGCCTCTTTCTGGACTCGGACTCACACAAAGTGTGTAGTGCTTCCAATGTCAAGTCCAAGGAACAACCTAGTTCAGGCATCCAACAAGTCCACAATGGTGACACCGGAGATGTTCCTGCACCTACTGGACTGGCAAGGTCAGGAACTTGCAGGGAAAACAATGAAGACAATAACAATAACGAGGAAGAGTCTAAGGAAGAGGAAATAGATGCTGATGCAGAAATAGAGTGGTCTGCTCTTGAAGGAGTGACTCGTGTGAACACATTACTAAACCTCCCAAGGTTTGAACCTGAGAAACAAGACAAGGGGATGAGAAAAAACAAATGA 1119 0.4584 MGSCFSAESRSPHPNSPSSSSLRKSKSNNKKRLGSRASSFEYWRNEPLHRIPGRTFLNGSSQLASLFTQQGKKGTNQDAMIVWENFCSRQDTVFCGVFDGHGPYGHMVAKRVRDSLPLKLNSHWELSASGEEVLKEISVNTAASMNSEEAAFTSADDESRVSVDMEETEKHPEIFQTLKESFLKAFKVMDRELKTHQSIDCFCSGTTAVTLIKQIWDVLSNKEVVDIVAATPRRASAARALVESAVRSWRYKYPTSKVDDCAVVCLFLDSDSHKVCSASNVKSKEQPSSGIQQVHNGDTGDVPAPTGLARSGTCRENNEDNNNNEEESKEEEIDADAEIEWSALEGVTRVNTLLNLPRFEPEKQDKGMRKNK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0536 372 MobiDBLite consensus disorder prediction 1 24 - -
Aed3g0536 372 PANTHER ALPHABET, ISOFORM E-RELATED 215 355 - -
Aed3g0536 372 PANTHER ALPHABET, ISOFORM E-RELATED 1 214 - -
Aed3g0536 372 SUPERFAMILY PP2C-like 55 269 IPR036457 -
Aed3g0536 372 MobiDBLite consensus disorder prediction 279 296 - -
Aed3g0536 372 Gene3D - 59 213 IPR036457 -
Aed3g0536 372 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 215 355 - -
Aed3g0536 372 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 214 - -
Aed3g0536 372 MobiDBLite consensus disorder prediction 1 36 - -
Aed3g0536 372 Coils Coil 315 335 - -
Aed3g0536 372 ProSiteProfiles PPM-type phosphatase domain profile. 63 268 IPR001932 -
Aed3g0536 372 MobiDBLite consensus disorder prediction 279 336 - -
Aed3g0536 372 SMART PP2C_4 54 266 IPR001932 -
Aed3g0536 372 Gene3D - 214 277 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0536 Aed-Chr3 3793519 3798780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0536 215 363 PP2C-type Phosphatase Gene Family AT3G02750 54.248 6.70e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0536 - - gmx:100790373 384.415