Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0523 ATGGCCTCCATTGCACCCAAAAGCGTGTGTTCCAACGGGGTCTTTGAGAATGGTAGCACGATGGAGATGATAAGCCAACCCGTGACGGAATGGGAGAAGCTAAAGCTACTGGGTGAGGGCTCCTACGGAACCGTCTCGCTAGCTGTTCTCACTGCGCCAGAAGAAGCCAAAGGTTCGCTGATAGCCGTCAAGACTTCGAAGCCAAACTGCTTGGAATCGTTGAAGAAAGAAGGAACCATACTTGATTCTTTCTTCGGCTGCAAAGAAATCCTTCAATGCATCTGGAGTTTATTCACTATGGACAACAATGGCCGCTTTGTCTACAATCTCATCATGGAGTTCGCTCCCTGCGGTTCCCTCGGTAACTTTATCAGAAAGCAACCACTCATGGAAAGTCACGTTAGCGTCTACACGCGCATGCTCCTCGTAGGGCTCACCCTCGTCCATCAAATCGGAGTAGTCCATTGCGATTTGAAACCCGATAACATACTCCTCTTCCCCTCGTGCGACCAGGAGAATATTCATGTTGGTGCGAAGTATCAACTCAAGATCGCGGATTTCGGACTCTCCAGGACCAAAGACGAGGACTTCGACGCCGACTTCTGGAAGATAAAGTTCAAAGGAACGCCGTTCTACATGTCGCCGGAGTCTGTGATGGGACAGATCGAGACGCCGTTGGATATATGGTCTCTTGGCTGCATCGTTATCGAGATGATAACGGGTTTGCCTGCATGGGAAAACCACGTTACCAACATACGGGAACTGATGTTCAAACTTGTGTTCCTTAAAGAATCGCCACCATTGCCTTCTGGTTTGAGTCCGCTTTGTGAAGATTTCTTGAACAAGTGTTTCGTGAAGGATCCTAGTCAGAGATGGACCGCCAACATGCTTCTCCATCATCCTTTTCTCTCTGCTCCTAAATATCCATACATGTGGTGA 939 0.4867 MASIAPKSVCSNGVFENGSTMEMISQPVTEWEKLKLLGEGSYGTVSLAVLTAPEEAKGSLIAVKTSKPNCLESLKKEGTILDSFFGCKEILQCIWSLFTMDNNGRFVYNLIMEFAPCGSLGNFIRKQPLMESHVSVYTRMLLVGLTLVHQIGVVHCDLKPDNILLFPSCDQENIHVGAKYQLKIADFGLSRTKDEDFDADFWKIKFKGTPFYMSPESVMGQIETPLDIWSLGCIVIEMITGLPAWENHVTNIRELMFKLVFLKESPPLPSGLSPLCEDFLNKCFVKDPSQRWTANMLLHHPFLSAPKYPYMW 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0523 312 SUPERFAMILY Protein kinase-like (PK-like) 23 306 IPR011009 -
Aed3g0523 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Aed3g0523 312 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 29 305 - -
Aed3g0523 312 Gene3D Transferase(Phosphotransferase) domain 1 22 310 - -
Aed3g0523 312 Pfam Protein kinase domain 32 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0523 312 SMART serkin_6 31 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0523 312 ProSiteProfiles Protein kinase domain profile. 31 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0523 312 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 29 305 - -
Aed3g0523 312 ProSitePatterns Protein kinases ATP-binding region signature. 37 64 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0523 Aed-Chr3 3729417 3730355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0523 30 304 MAP Kinase Kinase Kinase AT4G36950 39.007 4.38e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed3g0523 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0523 - - gmx:102667952 450.669