Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0504 ATGAGGATGGTTATGGGTGGCCAAATTTTCGGTGCTGGTGTTATTATTGTTAGTTTCTTTCTGTTGATTCTCTGTGGCATGGTTTGTGGGACTGATAGTGATATATTCTGCTTGAAAAGTGTAAAGAGTGCACTTGAGGACCCCTACAATTATTTGCAATCCTGGGATTTCAATAACAAAACAGAAGGGTATATATGCAAGTTTACTGGGGTTGAGTGTTGGCACCCTGATGAGAACAAGGTCTTGAATCTCAAACTCTCCAACATGGGGCTCAAGGGCGAGTTCCCTCGTGGCATTCAAAATTGCACAAGCATGACAGGATTAGATTTTTCGCTTAACCGACTCTCTAAACCCATTCCGGCCGATATATCCACACTTCTTACATTTGTGACAACTCTTGATCTATCTTCAAATGATTTTACTGGGGAGATACCTGCATCCCTTTCAAATTGTACCTATATTAATACTCTTAGACTTGACCAAAACCAACTCACTGGTCAAATTCCTGCAAACTTGAGTCAGCTCCCGCGGCTTAAGTCGTTTAATGTTGCCAATAATCTTTTGACAGGGCCAGTTCCACCCTTTAAGAGTGGTGTAGCTCCTGCAGAAAATTATGCAAATAATTCAGGCCTCTGTGGTGGTCCCTTGGATGCTTGTCAGGCCCAGTCTTCAAAGCGTAACACTGCTGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTGTTGCAGTGTTAGGTTTGGGCATTGGAATGTTCTTTTACGTGCGACGTATTTCTTATAGGAAGAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCACGAAGTCTAAAGGGAACTAAAACAATTAAGGTTTCTATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAATGATCTCATGAAGGCTACTAATAACTTCAGCAAAAGCAATATTATTGGGACTGGAAGATCAGGAACCCTTTACAAAGCTGTCCTTCATGATGGCACAACACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTCTGTCTGAGATGAATACACTAGGGTCTGTCAAGCATCGTAACTTGGTTCCTCTTTTAGGTTTCTGCGTGGCTAAAAAGGAAAGGCTTGTGGGTGTAGACCCAGAGCTTTTCCAATTCCTGAAGGTTGCATGCAACTGTGTTACAGCAATGCCAAAGGAGAGGCCTACTATGTTTGAAGTATACCAGCTTCTAAGAGCAATTGGGAAAAATTATAATTTCACAATTGAGGATGAGATGCCGCCTATAGACATTGGTGATGATGATAACTTAGGAGAACTTATACTCGAGAGGGACATGATTGAAAAGGTTTTATGGTCAAGATCCATTTGTGTGCTATCAATATTGAAACATCAATCATCAATCATGAATGCCCGGCGTGGTCCAATTGGCTACATTTTGTTTTGGGCCGTGGAAGCAAGCATGGATACATAA 1467 0.4165 MRMVMGGQIFGAGVIIVSFFLLILCGMVCGTDSDIFCLKSVKSALEDPYNYLQSWDFNNKTEGYICKFTGVECWHPDENKVLNLKLSNMGLKGEFPRGIQNCTSMTGLDFSLNRLSKPIPADISTLLTFVTTLDLSSNDFTGEIPASLSNCTYINTLRLDQNQLTGQIPANLSQLPRLKSFNVANNLLTGPVPPFKSGVAPAENYANNSGLCGGPLDACQAQSSKRNTAVIAGAAVGGVTVAVLGLGIGMFFYVRRISYRKKEEDPEGNKWARSLKGTKTIKVSMFEKSISKMNLNDLMKATNNFSKSNIIGTGRSGTLYKAVLHDGTTLMVKRLQESQHSEKEFLSEMNTLGSVKHRNLVPLLGFCVAKKERLVGVDPELFQFLKVACNCVTAMPKERPTMFEVYQLLRAIGKNYNFTIEDEMPPIDIGDDDNLGELILERDMIEKVLWSRSICVLSILKHQSSIMNARRGPIGYILFWAVEASMDT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0504 488 PANTHER LRR RECEPTOR-LIKE KINASE 376 424 - -
Aed3g0504 488 Gene3D Ribonuclease Inhibitor 32 221 IPR032675 -
Aed3g0504 488 Gene3D Phosphorylase Kinase; domain 1 266 376 - -
Aed3g0504 488 SUPERFAMILY L domain-like 32 195 - -
Aed3g0504 488 PANTHER LRR RECEPTOR-LIKE KINASE 15 375 - -
Aed3g0504 488 PANTHER RECEPTOR-LIKE PROTEIN 55 376 424 - -
Aed3g0504 488 Pfam Protein tyrosine and serine/threonine kinase 308 373 IPR001245 GO:0004672|GO:0006468
Aed3g0504 488 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Aed3g0504 488 SUPERFAMILY Protein kinase-like (PK-like) 281 371 IPR011009 -
Aed3g0504 488 PANTHER RECEPTOR-LIKE PROTEIN 55 15 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0504 Aed-Chr3 3577137 3580573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0504 376 434 Receptor kinase-like Gene Family AT3G28450 39.344 5.70e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Aed3g0504 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0504 - - gmx:100817267 668.692