Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0500 ATGCAAACCTTCTACTTGTTCCTTTTCTTCTTGTCATGTGTACTTCACCAACTAGCCCCATCACAATCCTTGTTATTCACCAACACCAACAGAAGGATCCTCCATGAACCCTTTGTTCCATTAACCACTCTTCCTCCTTCTCAAGCACCAAAACCACAACCTCCTCATACTTCACCTTCAACACAAAAACAAAAACAAAAACAAAAACCCAAATATCCATCATCATCCACCATTCCCATCACCTCTACCACTACCACTACCACAACACCAACAACTACTACAACTACAACAGAATCACCATTTTTCCCATTATACCCTTCTTCCCCTCCACCTCCTTCTCCAATCACCTTTGCCTCCTTCCCTGCCAACATTTCCTCTCTCATTCTTCCTCACTCTCCCAAACCCAATTCCTCTTCCAACAAACTCCTCCCTGTCGCTCTCTCCGCCGTCGCCGCCGCACTCCTCGCCGTCATCATCACCGCCTTTGTCTGTTACCGCCGCCACCGGAATCCTCCCCTCCCCACTGACGGAAAACTTATCCGATCGGACACCGACTTCCGCCTGCTCCGGCGCAATGCCGAAACCGCGGTTGAAACACGCAAGCTCCGGCACACGTCCTCCACTAGCTCCGAGTTTCTCTACCTCGGCACTGTCGTTAACTCGCACGCAATTGAAGATGCCGCCGACGTCTCCGACTCCGGCGACGACCGGAAAATGGAGTCGCCAGAGCTTCGGCCGCTTCCGCCGCTCGCGCGACAAGCTTCCTTGCCGCCGCCGCCGCCTCCTCCGCAGTGCGAGGAGGCGGGGTTCACCACCGCGGGGGAGGAGGACGATGAGGAGGAGTTTTACTCGCCGAGAGGCTCGTCGTTGGGAGGCTCCGGCGGAACCGAATCGGGTTCCCGGCGAATATTCGCCGCCGGAAGAAGCGTGATCTCTAGTTCGTGCACTTCCTCTTCCTCCGGCTCGCCGGCGAGTTCGAGTTCCCGGAGAACACAACCGAAGTCACCGGAAAATCACAACCACCAACACGTGCAGTCTTCTTCTTCTTCGTTGTGCTCAACACCAGATAGGGTTTCCACTGAACATAATTCAAATGAAGCATTAAGTGCATGTACACATGCACATGCATCATCATCATTACATAAAGGAACGTTGAAGAAAAATGAAAATGCATTATTATCACCACCACCACCGAGACTATCTAATGCTTCTTCTTCTTCGGCTTCGGCCTTTTCTCTTCCCTCTTCGCCGGAGAAGGTGACACGTAGTCACACTTTCGATCAGTCTCCGAGAATGTCGAGTGTCTCCGACGGACTAATGTTGCCGGGTTTGTCATCGGTGCCTTTGTCACCCGCCCTATTGTCATCACCTGAAACCGAAAGGGGAACTTTTAATGGATTGGGAACAGCTTCTTATGGTGTGCCTGCGCCGCAGAGGAAACACTGGAACATTCCGCCGCTGTCACTAACACCACCCTTTGATGAAATTGGAACGGTTCCGGTTCCGGCTCCGGCTCCTCCACCTTTGCCACAGAGGAAGCACTGGGAGATTCCGGGCCCTGCTCCGCCACCACCGCCGCCAGTGTCACGGCAAAGGAAGCAGTGGGGAGTGCCAGCACCGGCACCGGCACCGGCACCGGCATTGGGGCCGTCGACACCTGTTTCGAGGCCACCGGAATTGGTGCCTCCTTCGAGGCCTTTTGTGTTGCAAAACCAAGGAACCAATGTTGAGTTGCCCGCGAGTTTAGGGGAAATTGAAGAGACTAGTAAACCAAAATTGAAGGCCCTGCATTGGGACAAAGTGAGAACTACCCCTGATCGTGAAATGGTGTGGGATCAGATGAAGTCAAGCTCGTTTAAATTGAATGAGAAAATGATTGAAACATTGTTTGTAGCGAACACACCAAACCCAAAGTCCAAGGATGCAACTATGAGCTCAGTTTTTCACCAGCCGAATCAGGAGGAAAGAGTACTTGATCCTAAAAAGTCTCAGAATATTTCAATCTTGCTGAAAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTCTTAGAAGGTAGTACTGATACACTTGGAACAGAATTACTTGAAAGCTTATTAAGAATGGCACCAAGTAAGGAAGAAGAACGTAAGTTGAAGGAACATAAAGATGACTCACCAACCAAGCTGGGTCTGGCTGAAAATTTTTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGATTGAAGCAATGCTTTACATAGCCAATTTTGATTCAGAAGTGGAGTATCTTAGGACATCCTTTCAAACTATAGAGGCTTCATGTGAAGAGCTGCGACATTGTAGAATGTTCTTGAAGCTTTTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACCAACCGTGGGGATGCAGAAGCATTCAAACTTGATACTCTTCTCAAACTGGCCGACGTCAAAGGCGCAGATGGGAAGACCACTCTACTGCATTTTGTTGTACAGGAAATTATCCGAACTGAAGGTGCTCGTATATCTGGAACTAATCAAACTCCAAGCTCTACTTTGACTGAAGATGCCAAGTGCAGGAGGCTTGGCCTACAAGTTGTATCAAGCCTGAGTTCAGAGCTAGCAAATGTGAAGAAGGCAGCTGCTATGGATTCTGAAGTTCTCAGCAGTGATGTCTTAAAACTTTCCAAAGGAATTGCAAGCATAACAGAGGTTGTGCAATTAAATCAAACGATGGGATCAGATGAAAGCAGCCAGAAATTTACAGAATCAATGAACAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTGCTTCCTCCCTTGTGAAGGGGATTACAGAGTATTTTCATGGGAACCTGACAAAGGAAGAAGCTCATCCATTTAGAACTTTCATGGTTGTAAGAGACTTCCTAGCAGTTCTTGACCGGGTCTGCAAAGAAGTTGCAATGATAAATGAGAGAACTATGGTTAGTTCAGCTCATAAATTCCCTGTGCCAGTTAACCCTATGCTTCCACAACCCCTTCCCGGATTACATGAGAGGCAACAGTATAATAGTTCTTCTTCAGATGATGACAGTTCATCTTCCTCACCTTAG 3120 0.484 MQTFYLFLFFLSCVLHQLAPSQSLLFTNTNRRILHEPFVPLTTLPPSQAPKPQPPHTSPSTQKQKQKQKPKYPSSSTIPITSTTTTTTTPTTTTTTTESPFFPLYPSSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPVALSAVAAALLAVIITAFVCYRRHRNPPLPTDGKLIRSDTDFRLLRRNAETAVETRKLRHTSSTSSEFLYLGTVVNSHAIEDAADVSDSGDDRKMESPELRPLPPLARQASLPPPPPPPQCEEAGFTTAGEEDDEEEFYSPRGSSLGGSGGTESGSRRIFAAGRSVISSSCTSSSSGSPASSSSRRTQPKSPENHNHQHVQSSSSSLCSTPDRVSTEHNSNEALSACTHAHASSSLHKGTLKKNENALLSPPPPRLSNASSSSASAFSLPSSPEKVTRSHTFDQSPRMSSVSDGLMLPGLSSVPLSPALLSSPETERGTFNGLGTASYGVPAPQRKHWNIPPLSLTPPFDEIGTVPVPAPAPPPLPQRKHWEIPGPAPPPPPPVSRQRKQWGVPAPAPAPAPALGPSTPVSRPPELVPPSRPFVLQNQGTNVELPASLGEIEETSKPKLKALHWDKVRTTPDREMVWDQMKSSSFKLNEKMIETLFVANTPNPKSKDATMSSVFHQPNQEERVLDPKKSQNISILLKALNVTIEEVCEALLEGSTDTLGTELLESLLRMAPSKEEERKLKEHKDDSPTKLGLAENFLKAVLDVPFAFKRIEAMLYIANFDSEVEYLRTSFQTIEASCEELRHCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARISGTNQTPSSTLTEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSDVLKLSKGIASITEVVQLNQTMGSDESSQKFTESMNKFIRMAEEEIPKIQAQESVASSLVKGITEYFHGNLTKEEAHPFRTFMVVRDFLAVLDRVCKEVAMINERTMVSSAHKFPVPVNPMLPQPLPGLHERQQYNSSSSDDDSSSSSP 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0500 1039 MobiDBLite consensus disorder prediction 251 266 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 58 102 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 40 105 - -
Aed3g0500 1039 PANTHER FORMIN-RELATED 8 1036 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed3g0500 1039 MobiDBLite consensus disorder prediction 307 385 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 1009 1039 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 228 243 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 1020 1039 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 539 564 - -
Aed3g0500 1039 PANTHER FORMIN-LIKE PROTEIN 1 8 1036 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 395 435 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 497 531 - -
Aed3g0500 1039 SMART it6_source 583 997 IPR015425 -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 43 57 - -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 228 569 - -
Aed3g0500 1039 SUPERFAMILY Formin homology 2 domain (FH2 domain) 596 994 - -
Aed3g0500 1039 ProSiteProfiles Formin homology-2 (FH2) domain profile. 583 1008 IPR015425 -
Aed3g0500 1039 Pfam Formin Homology 2 Domain 587 982 IPR015425 -
Aed3g0500 1039 Gene3D Formin, FH2 domain 589 1003 IPR042201 -
Aed3g0500 1039 MobiDBLite consensus disorder prediction 449 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0500 Aed-Chr3 3552823 3557530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0500 554 1024 FH2 protein (formin) Gene Family AT3G25500 72.141 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0500 - - gmx:100801837 1416.75