Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0495 ATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTCATCATCGCCTTCAACGCCCTGACCTTGAAGACGATGAGAACCAACAAGACCAAGACGACAACAACAACAACGTTAACGATCACGAAGGGCTTGACCTAGTTTCACCAAATCAAGGTGGTCCTGGTGATGTTGTTGCTCGCAGGCCAAGAGGAAGACCCCCAGGTTCCAAGAACAAAGCTAAACCACCAGTTATCATCACAAGAGAGAGTGCAAACACCCTTAGGGCTCATATCCTTGAAGTTAGTAGCGGTTGTGACGTCTTTGACTCGGTCGCTACCTATGCAAGGAAGCGACAAAGAGGGATCTGTGTCCTCAGTGGGAGTGGCACCGTGACCAACGTGACGTTACGGCAGCCGGCCGCGGCTGGTGCCGTTGTCACGCTGCACGGAAGGTTCGAGATCCTGTCTTTGTCAGGATCATTTCTCCCACCTCCTGCTCCACCAGGTGCCACAAGTTTGACTGTGTTCCTTGGTGGAGGTCAGGGTCAAGTGGTGGGAGGAAACGTTGTTGGTCCTTTGGTGGCTTCTGGGCCTGTCATTGTTATTGCCTCATCTTTTACTAATGTAGCATATGAGAGGTTACCCTTGGATGAAGATGAATCTATCCAGATGCAACAAGGGCAATCATCTGGTGGTGGCAATGGTGGCAACGGTGGTGGAGTTGGTAATAACTCTTTTCCGGACCCGTCTTCTGGGCTTCCATTCTTCAATTTGCCCCTAAACATGCCTCAGTTACCTGTTGATGGTTGGGCTGGGAACTCTGGTGGAAGGCAATCTTACTGA 822 0.5073 MAGIDLGSASHFVHHRLQRPDLEDDENQQDQDDNNNNVNDHEGLDLVSPNQGGPGDVVARRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDESIQMQQGQSSGGGNGGNGGGVGNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0495 273 PIRSF ESCAROLA 3 267 IPR014476 GO:0003680
Aed3g0495 273 Gene3D - 87 221 - -
Aed3g0495 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
Aed3g0495 273 MobiDBLite consensus disorder prediction 214 244 - -
Aed3g0495 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 215 - -
Aed3g0495 273 CDD DUF296 88 163 IPR005175 -
Aed3g0495 273 ProSiteProfiles PPC domain profile profile. 84 221 IPR005175 -
Aed3g0495 273 MobiDBLite consensus disorder prediction 214 246 - -
Aed3g0495 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 273 IPR014476 GO:0003680
Aed3g0495 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 273 - -
Aed3g0495 273 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0495 Aed-Chr3 3528046 3528867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0495 1 270 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.883 1.70e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0495 - - vra:106758954 428.713