Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0483 ATGGCCTCCCCTTCTTCCCCCACCGACTCCAATCCTCCCTCCGCCGTGCCCCTCCCTCTCCCTCCTCCCCCCGCCGCCACCTCCTCCCGGCGTCTCCCTCCGCCGTGCTGGACCCCGGAGGAAACCGCCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGGCCGCACCAACCTCAAAGCCACCCACTGGCAAGAGGTGGCCGACGCCGTCACCGCCCAGTGCCCCAACGCCTCCCCCACGGCCAAGACCGCCGTCCAGTGCCGCCACAAGATGGAAAAACTCCGGAAACGGTACCGCACCGAAATCCAACGGCTCCGCAACCTCCCCATCCCCCGCATCAACAGCACCACCAATTCCCCGTCTTCCTGGGTCCACTTCAAATCCATGGACACCATGGAAAAAGGCCCCAACAACAATAACAAACCCAACAACGCCGACAACAACAACCTCAATTTCCACGATGAAGACGTAGACGACGACGATCTGTACGAAGAATTCAAAAACGCCCCCGGATCCAACACCAGGAGCCTCAACAAGCTCTACAAGAACAACAACGGTTTCAATTCGGGAGGCTCGGGCTCCGGATCCGGGTTTCGGATCCGGATCCCGGCCGGGGTGCAGCAGCAACACCACACGCCGTCGTCTAACAAGTTTTTCAACAGCCCTCCTCCCCCACGTGGCGGTGGTGCGAGCAACGGTGTCGGAGTGAAGAGGGAGCGCGGCGGCGGCGAGAGGGACGCGCTGGCGGAGATGGTGGGCGCGATCAAGGTCCTTCGCGACGGGTTCGTTAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACCGAGATGATCCTGGACTCGCAGCAGAGGATTGTTGAGGCTTTTGCTAGGGCCGTTTCGCAGAAGAGGACCAAGGCCAAGTCTACGCCCTCGCCTTCATCGCAACCGTAG 981 0.6147 MASPSSPTDSNPPSAVPLPLPPPPAATSSRRLPPPCWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRNLPIPRINSTTNSPSSWVHFKSMDTMEKGPNNNNKPNNADNNNLNFHDEDVDDDDLYEEFKNAPGSNTRSLNKLYKNNNGFNSGGSGSGSGFRIRIPAGVQQQHHTPSSNKFFNSPPPPRGGGASNGVGVKRERGGGERDALAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFARAVSQKRTKAKSTPSPSSQP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0483 326 MobiDBLite consensus disorder prediction 1 35 - -
Aed3g0483 326 ProSiteProfiles Myb-like domain profile. 37 98 IPR001005 -
Aed3g0483 326 Gene3D - 37 103 - -
Aed3g0483 326 Pfam Myb/SANT-like DNA-binding domain 35 135 IPR044822 -
Aed3g0483 326 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 322 IPR044823 -
Aed3g0483 326 MobiDBLite consensus disorder prediction 10 30 - -
Aed3g0483 326 Coils Coil 91 111 - -
Aed3g0483 326 Coils Coil 272 292 - -
Aed3g0483 326 PANTHER TRANSCRIPTION FACTOR 5 322 - -
Aed3g0483 326 SMART 118neu2 44 140 IPR006578 -
Aed3g0483 326 MobiDBLite consensus disorder prediction 133 153 - -
Aed3g0483 326 MobiDBLite consensus disorder prediction 209 243 - -
Aed3g0483 326 MobiDBLite consensus disorder prediction 133 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0483 Aed-Chr3 3481713 3482693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0483 36 135 Trihelix Transcription Factor Family AT3G14180 33.000 1.30e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed3g0483 Myb_DNA-bind_4 3.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0483 - - gmx:102665993 454.136