Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0471 ATGCTCCTCCGTTACTCTCTGCACCTCCCAATTACATCTTCTTACTCACACACCTCTAACCGCAGCGGCCCCAACAGTAACAGTAGCGGTTACATCAAGTTCCGAACACGGTACCGCGAAAACCTGCGATACCTGCGAGCCTTAACAATAATCGACTCCAAAACCAAACCTGAGGACCTTCCTCTCCCCAACGACGTGGACCACATCATCGACACTCTCTCATTCCTCAAGTCCCACTCTTTCTCAGATGCCGACATTCCCCGACTCCAGTTCCTGACCCCAGAGCTCTTCACCACCGCCGTCGTGCCCTCCGACTTCGCCGACGTGTTCCGCTTCCTCGCCGACGACCTCGCCGCCACCAAATCCGAGTCCCGCGACCTCATCCTCCGCTGCCCCAAACTGCTCTTCTCCCACGTCGACCACTGCCTCCGACCCACGCTCCAATTTCTCCGGCAGGTTGGGGTCCAGGGGCTGAACCGGCCCACAACCAGGAACGCGCACTTGCTGAACACGCGCGTGGACAAGCTGCACGCCAAGGTTGAGTTCCTGCAGGAGCTGGGGTTTTCGTACGAGGAGGCAGTGAGAGCATGTGCGAGGTTGCCCGCGATTTTCGGGTATGACGTGGAGAACAATCTGTGGCCAAAGTTTGTGTATCTTATTAAGGAGATGGAGAGGGACTTGGAGGAGTTGAAGAGGTTTCCTCAGTACTTCGGTTTCAGTTTGAAGGATAGGATTGTGCCAAGGCACTTGCATTTGAAGAAAAGGAGTGTTAGGATTCCCTTGAACAGAATGCTCATGTGGGGTGATGATAAGTTCTACGCCAAGTGGAAGTGA 834 0.548 MLLRYSLHLPITSSYSHTSNRSGPNSNSSGYIKFRTRYRENLRYLRALTIIDSKTKPEDLPLPNDVDHIIDTLSFLKSHSFSDADIPRLQFLTPELFTTAVVPSDFADVFRFLADDLAATKSESRDLILRCPKLLFSHVDHCLRPTLQFLRQVGVQGLNRPTTRNAHLLNTRVDKLHAKVEFLQELGFSYEEAVRACARLPAIFGYDVENNLWPKFVYLIKEMERDLEELKRFPQYFGFSLKDRIVPRHLHLKKRSVRIPLNRMLMWGDDKFYAKWK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0471 277 PANTHER CGI-12 PROTEIN-RELATED 16 277 IPR003690 GO:0003690|GO:0006355
Aed3g0471 277 Gene3D Transcription termination factor 3, mitochondrial 54 277 IPR038538 -
Aed3g0471 277 SMART mt_12 194 226 IPR003690 GO:0003690|GO:0006355
Aed3g0471 277 SMART mt_12 159 189 IPR003690 GO:0003690|GO:0006355
Aed3g0471 277 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Aed3g0471 277 SMART mt_12 227 258 IPR003690 GO:0003690|GO:0006355
Aed3g0471 277 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 16 277 - -
Aed3g0471 277 Pfam mTERF 116 272 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed3g0471 mTERF 3.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0471 K15032 - gmx:100812333 516.153