Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0470 ATGGAAGGAGAGAGAGGTGCTGCTCCCAATTATGAGCTTCAAGTTTCGTTCACCAACACCCCACAAGCCATTCACGAAATGGGTTTTGTTCAATATGAAGAAAACCAGGTCCTTGGTTTCTTGTCTCCCTCTTCAGTACAATCTCAATCCTTAAATAACGATATGGTCGTTGCTGCCACCACAACCACTGCCGCCGCAACCATCGGATTCATGAATCATAGCGAACTTGTCACCAAAACTTGGAATAACGACCAGCAGGTAGGAACTCTGGATCCAAAGCCTGTCGAAGAAGAAAATTGCACTGGACATGGTAGTGATCAAGGCAATAACAACAACGCTTGGTGGAGGAGTGCAGCTACAGAGAAGAGCAAGGTGAAAATAAGGAGGAAGCTTAGGGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGTCTTCATCCAAGGTACTAA 510 0.4412 MEGERGAAPNYELQVSFTNTPQAIHEMGFVQYEENQVLGFLSPSSVQSQSLNNDMVVAATTTTAAATIGFMNHSELVTKTWNNDQQVGTLDPKPVEEENCTGHGSDQGNNNNAWWRSAATEKSKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0470 169 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 168 IPR044810 GO:0003700
Aed3g0470 169 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 168 - -
Aed3g0470 169 Pfam WRKY DNA -binding domain 148 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0470 169 SUPERFAMILY WRKY DNA-binding domain 139 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0470 169 ProSiteProfiles WRKY domain profile. 142 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0470 169 Gene3D WRKY domain 134 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0470 Aed-Chr3 3418685 3420292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0470 3 168 WRKY Transcription Factor Family AT2G44745 49.711 2.82e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g0470 WRKY 1.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0470 - - gmx:100526878 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0470 3 3418685 3420292 Aed3g0470 3 3418685 3420292 ECH
Aed2g1740 2 21992373 21993225 Aed3g0470 3 3418685 3420292 PCT