Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0456 ATGATATGTGATATGGAGAGGGTAGCAGAGCCAAAGGTACTTCCACGGTCCTTGCCAGTTCTGGTTGAGGTATCTAACGCACACACGGCTGCAATAAGAGAAGCAAGTCAAAGACTAAACGGGCAGGATGTGCGCGCCCCTATGACAAGGCTGGCCTCCATCAGAGAAGTGGCGCAGTTATCAAATGCACGAATAGTTTTGGTAAGAGATGATATGGGATTTGATACACGCTGTCAAGAGCCTCCCTCCCCGGCAGCAGCGCCTATAAGAACTTGGAAAGGAAAGGGTTCTTTACCATCAGAAGTTGTAGAACTTGTACCTGATATTGAGAAATTGAAGGGTGGCAATGATTCTTTTCTGGAAACTGGTTCGAGCTCATTTGCTGGTGCTAGTCATCCCCCGGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTGCCAATAGGTCAAACTAAACCTGAAGCTGGATGCTTAATGAAGAGCGTGTCCTTGAAGAGTCCTTTCTTAGAGGATCTTTCAATTCGTGTCCCTCCTAAGAAACCAAGCCTGGTTGAAGAAACAAATGAGATGATTATGTGTAACTTATCCTCGCCATTTTCAGTTTCAGGTGCTCGTGCATCGCAGAATACTGAAAACTCTCCCCTGGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGCAATGTGAGTCCTCATAGCAGTATCGATAGTACTAGCGTTGTCAGAACAATGAGCATTGTGAATAGTTGTGCAAGTACATATCGGAGTGATGCAGTCACAAGTGATGGCATGCTTAGTTTGGACAGGAATTGCGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGCGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACCGGCAGTGCCAATAAGCCACACAAAGGGAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCACGGGACGGAATTTTGGGCATGAGTCATTTCAGGTTACTCAAACGGCTTGGCTGTGGCGATATTGGAAGTGTATATCTCTCGGAGTTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTGGCAAGCAGGAATAAGCTAAGTAGGGCACAGACGGAAAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACCTTAAGGCAACGGCAACCTGGGAAGCATTTCTCAGAGTATGCTGCACGAAATTTCGACGGCGACCCCTCAAAGCGAGCTGGTGGTGCATTCTGTGTCCAGCCCGCCTGTATTGAGCCTTCATCAGTATGCATCCAGCCTTCGTGTTTCATGCCTCGCCTCTTTGCTCAGAAAAACAAGAAGTCACAACGAAAGTCTAAAGCCAAACCTGGCGGCGTGCCATCCAGCATGCTTCCTGAGCTTGTTGCCGAACCAACAACAGCTCGGTCGGAGTCTTTCGTGGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGTTACTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCTACATTGTTCAATGTAGTAGGCCAGCAGCTCAGATTCCCTGAATCGCCGGCCACGAGTTATGCAGCCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGGCTCGGGGTGAAGAGGGGCGCTACCGAGATCAAACAGCACCCCTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCCCCAGAAGTTCCAAGACCAGTTGAATGTGATCTACCGGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACAACAACAACAACAATATAAACAACAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATAATGAGATGAAGTCTGGGGTTTGTAATTGCTTCCTTGCTCGCTAG 2103 0.4731 MICDMERVAEPKVLPRSLPVLVEVSNAHTAAIREASQRLNGQDVRAPMTRLASIREVAQLSNARIVLVRDDMGFDTRCQEPPSPAAAPIRTWKGKGSLPSEVVELVPDIEKLKGGNDSFLETGSSSFAGASHPPEPVDTDLMRTVYVPIGQTKPEAGCLMKSVSLKSPFLEDLSIRVPPKKPSLVEETNEMIMCNLSSPFSVSGARASQNTENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLSRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARNFDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSQRKSKAKPGGVPSSMLPELVAEPTTARSESFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYAARDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVECDLPAKFEPVDTVGVGNNNNNNINNNNSSKRMVGNNNNEMKSGVCNCFLAR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0456 700 MobiDBLite consensus disorder prediction 495 514 - -
Aed3g0456 700 MobiDBLite consensus disorder prediction 203 245 - -
Aed3g0456 700 PANTHER FLIPPASE KINASE 1-RELATED 454 675 - -
Aed3g0456 700 Gene3D Phosphorylase Kinase; domain 1 343 463 - -
Aed3g0456 700 PANTHER FLIPPASE KINASE 1-RELATED 56 453 - -
Aed3g0456 700 Gene3D Transferase(Phosphotransferase) domain 1 524 645 - -
Aed3g0456 700 SUPERFAMILY Protein kinase-like (PK-like) 523 660 IPR011009 -
Aed3g0456 700 ProSiteProfiles Protein kinase domain profile. 349 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0456 700 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 56 453 - -
Aed3g0456 700 MobiDBLite consensus disorder prediction 662 684 - -
Aed3g0456 700 Pfam Protein kinase domain 525 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0456 700 Pfam Protein kinase domain 350 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0456 700 MobiDBLite consensus disorder prediction 278 326 - -
Aed3g0456 700 SUPERFAMILY Protein kinase-like (PK-like) 331 453 IPR011009 -
Aed3g0456 700 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 454 675 - -
Aed3g0456 700 MobiDBLite consensus disorder prediction 278 322 - -
Aed3g0456 700 MobiDBLite consensus disorder prediction 661 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0456 Aed-Chr3 3230236 3235569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0456 2 683 AGC Kinase Gene Family AT2G44830 58.540 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed3g0456 Pkinase 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0456 - - gmx:100800019 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0456 3 3230236 3235569 Aed3g0456 3 3230236 3235569 ECH
Aed2g1762 2 22330359 22334445 Aed3g0456 3 3230236 3235569 PCT