Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0442 ATGTTTCTTAAGACTCTTTTCATTTTATGTGTAATAGTTAAATTAAGGACCCAAAGGTTAAAGCAGGCAAAGGATGAGGCAGAGAGGGAGGCAGCACAGTACAGGGCTCACATGGAAGATGAGTATCAAAAGTCAATTTCAGAGAACACTGGAAGTTCTGGATCTAATGTGAAAAGGCTTGAGGAGGAGACAGATGCTAAGATTAAAAATTTAAAGAAATCAACTTCAAAGGTCTCATCAGAAGTGGTTGACATGCTACTCAAGTGTGTTACAAATATCAAAACATAA 288 0.3715 MFLKTLFILCVIVKLRTQRLKQAKDEAEREAAQYRAHMEDEYQKSISENTGSSGSNVKRLEEETDAKIKNLKKSTSKVSSEVVDMLLKCVTNIKT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0442 95 Coils Coil 57 77 - -
Aed3g0442 95 Pfam Vacuolar (H+)-ATPase G subunit 14 94 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aed3g0442 95 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 14 95 - -
Aed3g0442 95 MobiDBLite consensus disorder prediction 27 58 - -
Aed3g0442 95 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 14 95 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aed3g0442 95 Gene3D - 13 95 - -
Aed3g0442 95 Coils Coil 17 44 - -
Aed3g0442 95 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0442 Aed-Chr3 3145903 3147445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0442 19 93 Primary Pumps ATPases(2) AT4G23710 53.333 3.20e-23 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0442 K02152 - gmx:100818549 143.28