Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0439 ATGAGAATTGGTTCTCCCTCGTCTTCTTCTTCTTCTTCCTGTTGTTCGCGTTTCTGGTCGTCGGCGCTCCGATCGAAGCGCCTCGTGTCGCCTGCGGAGAAGGCCGCCCGCGACAGCTCCGACCTCGGCCTCTCCCGCCGCCTCGGCGTCCTCGACCTCATACTCCTCGGAATCGGCGCCTCCATCGGTGCCGGTATCTTCGTCGTCACCGGCACCGTCGCCCGCGACGCCGGACCTGGAGTAACAATAAGTTTTATACTTGCGGGAGCATCATGTGTTATAAATGCACTATGTTATGCTGAACTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGAGCATATCTATATGCATACACAGCTTTTAATGAACTTACAGCTTTTCTTGTTTTTGGACAATTAATGCTTGACTATCACATTGGGGCAGCTAGTATAGCGAGAAGCCTAGCTAGTTATCTAATAAATATTTTAGAACTCTTCCCTGTTTTCAAAGATAACATTCCACAATGGTTTGGACATGGTCAAGACATTGGAGATGTGCTATCCATCAATGTCTTGGCTCCAATTCTGCTAATTCTTCTCACTTTAATTCTCTGTCAGGGTGTTCAAGAATCATCTGTTGTGAATTCTCTTATGACAGTGACCAAGATAATCATAGTTATCATCGTCATTTTTGCTGGAGCGTTTGAGGTTGATGCTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTAAAATCCATATTTACAGGAGCTACCGTAGTCTTCTTTGCATATGTTGGATTTGATGCAGTTGCCAATTCTGCCGAAGAATCTAAGAGGCCTCAGCGGGATTTGCCTATAGGCATAATTGGAAGCCTCTTAATATGTATTGCATTGTACATTGGAGTATGCTTGGTGATTACTGGAATGGTTCCATACACGCTTCTAGGAGAAGATGCTCCTTTGGCTGATGCTTTTACATCTAAGGGATTAAAATTTGTTTCTATTCTTATTAGTGTTGGTGCTGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTTTACGTTCAGCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGCTTACTACCCTCAATATTTGCTAATGTCCATTTCAAACGCCACACCCCTATTCACTCTCAGGTCTGGGCTGGATTGGTTGCCAGTGTTTTGGCTGGGCTATTTAATGTGCATATGCTCTCTCACATTCTTTCTGTTGGTACACTGACTGGCTATTCGGTTGTCTCAGCATGTGTTGTTGTTCTTCGCTGGAAGGATAAGACAAATGGTCAAGTGTCATCTTCTGCTGAGCGGGAAGGCATAATTTGCCTCATTTCTGTTTATGCAGATGCACCAGGGTTTTCTTGCCCATGGGTTCCCCTTCTGCCAAATATTTGCATCTTTTTTAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTTAGTGTTGTCATGGTTGGTGTTTATGCATTATATGGCCAATATCATGCTAACCCCAGTGCAGAAGAGCATGTCTATCACATAGCATCAGAGGAACAAACTCTATAA 1569 0.4449 MRIGSPSSSSSSSCCSRFWSSALRSKRLVSPAEKAARDSSDLGLSRRLGVLDLILLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFGQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPQWFGHGQDIGDVLSINVLAPILLILLTLILCQGVQESSVVNSLMTVTKIIIVIIVIFAGAFEVDASNWSPFAPNGLKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMVPYTLLGEDAPLADAFTSKGLKFVSILISVGAVAGLTTTLLVGLYVQQSRLYLGLGRDGLLPSIFANVHFKRHTPIHSQVWAGLVASVLAGLFNVHMLSHILSVGTLTGYSVVSACVVVLRWKDKTNGQVSSSAEREGIICLISVYADAPGFSCPWVPLLPNICIFFNMFLFAQLHHEAWVRFVILSVVMVGVYALYGQYHANPSAEEHVYHIASEEQTL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0439 522 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 446 512 - -
Aed3g0439 522 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 10 445 - -
Aed3g0439 522 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 446 512 - -
Aed3g0439 522 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 10 445 - -
Aed3g0439 522 PIRSF AA_transporter 32 521 - -
Aed3g0439 522 Gene3D Amino acid/polyamine transporter I 44 521 - -
Aed3g0439 522 Pfam Amino acid permease 48 476 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0439 Aed-Chr3 3124967 3130261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0439 10 445 Organic Solute Cotransporters AT1G05940 73.696 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0439 K03294 - gmx:100804988 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0439 3 3124967 3130261 Aed3g0439 3 3124967 3130261 ECH
Aed9g2212 9 25361235 25362176 Aed3g0439 3 3124967 3130261 PCT