Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0425 ATGGGGTTTAGGAATAATGCAATTCAGGCAGGGAGTTTGGATGTGGGAAAGTTAAAGGGAAGGATGCAAAAGGATGATGGTGCTGAAAAGGAAATTGGGTGCTGTGTTAAATTCTGTTTCATTGGGAGCTGTATACCTTCAAGATCAAAGGTTGATAACTCCATAAGTGGCACTAGTGCTAACAGTGTGGAAAAAACATCTGCATGTGCAAAAAGCAAGAAGGAAACAAATGCTCCTCCAGGGTCCTCTACAACAACCAGCAATGCAGAAAGTGTCCCTTCCACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTTACATTCAATGAGCTTAAGATGGCCACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTTGGTTGCGTGTTCAAGGGTTGGATTGAGGAAAATGGAACTGCACCAGTGAAACCTGGTACTGGGCTCACTGTTGCGGTCAAGACCCTCAACCATGATGGACTGCAGGGTCACAAAGAGTGGCTTGCAGAGTTAGACATTCTTGGTGACCTTGTCCATCTGAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATGTATGCCTCGTGGAAGTTTGGAGAACCACCTCTTCAGAAGTATGCTTTGA 672 0.436 MGFRNNAIQAGSLDVGKLKGRMQKDDGAEKEIGCCVKFCFIGSCIPSRSKVDNSISGTSANSVEKTSACAKSKKETNAPPGSSTTTSNAESVPSTPKFSEELKVSSRLRKFTFNELKMATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDLVHLNLVKLVGFCIEDDQRLLVYECMPRGSLENHLFRSML 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0425 223 PANTHER OS01G0588500 PROTEIN-RELATED 55 221 - -
Aed3g0425 223 ProSiteProfiles Protein kinase domain profile. 123 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0425 223 PANTHER RECEPTOR-LIKE KINASE PLANT 55 221 - -
Aed3g0425 223 MobiDBLite consensus disorder prediction 67 98 - -
Aed3g0425 223 Gene3D Phosphorylase Kinase; domain 1 97 208 - -
Aed3g0425 223 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Aed3g0425 223 SUPERFAMILY Protein kinase-like (PK-like) 93 222 IPR011009 -
Aed3g0425 223 Pfam Protein tyrosine and serine/threonine kinase 127 220 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0425 Aed-Chr3 3024741 3026801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0425 81 219 Glycoside Hydrolase AT3G07070 44.966 1.87e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed3g0425 PK_Tyr_Ser-Thr 4.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0425 - - gmx:100305393 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2161 9 24914686 24919319 Aed3g0425 3 3024741 3026801 PCT