Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0424 ATGCTCTTTGAAATTTTTATGCATAAGGAAGTTCATTGTTTTCTGGTAACAACCATGAATTGTGCAGAAGGGTCATTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTAGGTGCTGCAAAAGGTCTTACTTTTCTCCATGAAGAAGCTCAGAGGCCTGTAATCTATCGTGATTTTAAGACGTCTAATATTCTATTAGATGCGGAATACAATGCCAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTGAAGGGGAAAAGACACACATATCAACAAGAGTCATGGGAACATATGGTTATGCAGCTCCTGAGTATGTGATGACTGGTTGGGGGAACCGTGAGACAGTTTACTGGAATACAAAGTTTAGTAGGGACCAAGTTGACCAAGCTTGA 399 0.4085 MLFEIFMHKEVHCFLVTTMNCAEGSLPLPWSIRMKIALGAAKGLTFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGWGNRETVYWNTKFSRDQVDQA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0424 132 Gene3D Transferase(Phosphotransferase) domain 1 15 123 - -
Aed3g0424 132 Pfam Protein kinase domain 32 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0424 132 PANTHER OS01G0588500 PROTEIN-RELATED 24 112 - -
Aed3g0424 132 PANTHER RECEPTOR-LIKE KINASE PLANT 24 112 - -
Aed3g0424 132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 55 67 IPR008271 GO:0004672|GO:0006468
Aed3g0424 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0424 132 SUPERFAMILY Protein kinase-like (PK-like) 24 113 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0424 Aed-Chr3 3022502 3024397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0424 19 111 Glycoside Hydrolase AT3G07070 63.441 4.83e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed3g0424 Pkinase 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0424 - - gmx:100802866 181.8