Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0393 ATGGAGGGGACCAGCCAAAACACGTTTACCTTCATCCCCACCACGATTGAGCCACCTAGTTCAAGCCTCCCTCAGATATCAGCATCATCATCGTCATCCCCTGGCTCTCTTGCAAGAAATTTTGCACGAAGTTACCCTCCTGGTTTTCCAAGAAAGGTATTTGCGGAGGTTATAGGGACATTTCTGTTGGTTTTTGTGGGAAGTGGTTCAGCTGGACTAAGTAAGATAGATGAAAGCAAGGTGTCGAAGCTTGGAGCATCACTTGCAGGAGGACTCATAGTCACGGTCATGATTTACTCAATCGGACACATCTCAGGAGCACACATGAACCCAGCGGTTTCGCTTGCTTTTACCGCAGTCAGGCACCTTCCGTGGCCACAGGGTGTCCGTATTTTAATGATTGACGAGTATTGGGTAGTAGTGCTTTATTACTATAATCTTGAGCATATGGATATTGTTTTCCACACGTCGTTGAGTGAATCGGTGGACACACAACAATGTGTTCGTACTCACAACGGTTGA 522 0.4655 MEGTSQNTFTFIPTTIEPPSSSLPQISASSSSSPGSLARNFARSYPPGFPRKVFAEVIGTFLLVFVGSGSAGLSKIDESKVSKLGASLAGGLIVTVMIYSIGHISGAHMNPAVSLAFTAVRHLPWPQGVRILMIDEYWVVVLYYYNLEHMDIVFHTSLSESVDTQQCVRTHNG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0393 173 Gene3D Glycerol uptake facilitator protein. 25 145 IPR023271 -
Aed3g0393 173 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 41 127 - -
Aed3g0393 173 PANTHER AQUAPORIN NIP2-1 41 127 IPR034294 -
Aed3g0393 173 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed3g0393 173 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed3g0393 173 Pfam Major intrinsic protein 49 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed3g0393 173 ProSitePatterns MIP family signature. 108 116 IPR022357 -
Aed3g0393 173 MobiDBLite consensus disorder prediction 1 34 - -
Aed3g0393 173 SUPERFAMILY Aquaporin-like 49 130 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0393 Aed-Chr3 2773184 2773900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0393 51 125 Major Intrinsic Protein MIP AT1G80760 44.000 4.91e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0393 K09874 - gmx:100788071 187.193