Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0391 ATGTTGTCTGAAAAACTTTCCTACAACCCATCCTTAAACGTGCCTTTACTTCCCGAGTGGAAACACCATGATGAGGAAAAAGCCATAGCCTCTCACCCTTCTACCAAAAATACCGTGTCCTTCATTCGCACATGCCTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGAGGGTGGTTAAGCTTGGTTCTTCTGTTTGCTATTGCCGCTGCAACATTTTACACAGGCACGTTGATTCAAAGATGCATGGACAAGAATTCCAACATTAGAACCTACCCTGACATAGGTGAGCTTGCATTTGGAAAGATAGGAAGATTAATAGTATCAGCGTCCATGTACACGGAGCTCTACTTAGTTTCAATAGGGTTCTTGATTCTTGAAGGTGATAACTTGAGTAACTTGTTCCCCATTGAGGAGATTCAGATAGCTGGCTTAGCAATTGGTGGGAAGCAATTCTTTGTGATACTGGTTTCCCTTGTCATCTTGCCAACAGTTTGGTTGGATAACATGAGTTTACTTTCTTATGTATCTGCAAGTGGAGTCTTTGCTTCTGCTGTCATCATTCTTTCAATATCATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAACTACTCTTGTTCATTGGAATGGAATCCCCACAGCTGTTAGCTTGTATGCCTTTTGCTATTGTGCACATCCTGTCTTTCCCACCTTGTACAATTCCATGGCAAACAAACACCAGTTCTCTAATGTCCTACTTGTATGCTTTCTGTTAACCACTGTTGGCTATGCATCCATGGCTGTAATTGGCTATCTAATGTTTGGTGCTAATGTTGAATCACAAGTAACATTAAACCTGCCATTGGACAAAGTAAGCTCAAAATTAGCAATATATACAACCTTAGTGAATCCGATATCAAAGTTTGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGATTTACTTCCAAGTGCTTACAAGAATAGAGGGAGCAGCATCTTAGTAAGCACTGTGTTGGTAATCAGCGCTACAATTGTTGCTCTAACTGTTCCATTCTTTGGGGATCTGATGTCCTTAGTTGGAGCGTTTCTAAGTGTGACAGCTTCTATTCTGCTTCCATGTTTGTGCTACTTGAAGATTTCAGGCACTTACAGGAAATTTGGGCGTGAGACAGTAGCCATAGTGTTAATAATAGTAGCAGCTATAGCAATGGGAATAACTGGGACATACACCTCTATCATGGAAATAGTACACCATTTGTAA 1287 0.4071 MLSEKLSYNPSLNVPLLPEWKHHDEEKAIASHPSTKNTVSFIRTCLNGLNAISGVGILSVPYALASGGWLSLVLLFAIAAATFYTGTLIQRCMDKNSNIRTYPDIGELAFGKIGRLIVSASMYTELYLVSIGFLILEGDNLSNLFPIEEIQIAGLAIGGKQFFVILVSLVILPTVWLDNMSLLSYVSASGVFASAVIILSISWTATFDGVGFHQKGTTLVHWNGIPTAVSLYAFCYCAHPVFPTLYNSMANKHQFSNVLLVCFLLTTVGYASMAVIGYLMFGANVESQVTLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPSAYKNRGSSILVSTVLVISATIVALTVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGRETVAIVLIIVAAIAMGITGTYTSIMEIVHHL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0391 428 Pfam Transmembrane amino acid transporter protein 38 418 IPR013057 -
Aed3g0391 428 PANTHER OS05G0424000 PROTEIN-RELATED 34 425 - -
Aed3g0391 428 PANTHER AMINO ACID TRANSPORTER AVT1J 34 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0391 Aed-Chr3 2758088 2760308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0391 25 425 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.955 2.21e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0391 K15015 - gmx:100794374 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0391 3 2758088 2760308 Aed3g0391 3 2758088 2760308 ECH