Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0390 TATATATCAAACCTTGAAGAATTAAGATTGCAAACATCTGCTAGCTTATTGCAAAAAACTCAAACCTTTTCCATCAATCTATTTACCGTTTTTGTTCAAATGTCAGAAAAACTTTCGGACTTGAACGTGCCTTTGCTTTACGAGTGGGAGCATGGTGTGGATGAGGAGAAAGCCACAGCCTCTCATCCTTCTCCCGAAAACACTGTATCCTTCTTTCGCACCTGCCTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGGGGCTGGTTAAGCTTGGTTCTTTTGTTGGGTATTGCCGCTGCAGCATTTTACACCGGCACCTTGATTCAAAGATGCATGGACAAGAATTCAAACATTAGAACCTACCCTGATATTGGTGAGCTTGCATTTGGAAAGATGGGAAGACTAATTGTATCAGTGTCCATGTACACGGAGCTCTACTTGGTTTCAACAGGGTTCTTGATTCTGGAAGGAGATAACTTGAGTAACTTATTCCCCATTGGTGAGGTTCAAATTGTTGGCTTTGCAATTGGAGGGAAGCAATTCTTTGTTATATTGATTGCTCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTTTACTTTCTTGTGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGTCATTGTCTTGTCAATATTATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAAGTGCTCTTGTTCATTGGAATGGAATCCCCACAGCTGTTAGTTTGTATGCCTTTTGTTATTGTGCACATCCAGTCTTCCCCACCTTGTACAATTCCATGTCAAACAAACATCAGTTTTCTAATGTTCTACTTATATGCTTTCTATTAACCACTTTGGGTTATGCATCCATGGCTGTAATTGGTTATCTAATGTTTGGTGCTGATGTTGAATCACAAGTAACATTAAACCTGCCATTAGATAAAGTAAGCTCAAAATTAGCAATATATACAACCTTGGTGAATCCGATATCAAAGTTTGCTTTGATGGCAACACCTATCACCAATGCTTTGAAAGATTTGCTTCCAAGTACTTACAAGAATAGAGTGAGCAGCATCTTAGTAAGCACTGTCTTGGTAATAAGCACTACCATTGTTGCCCTAACTGTGCCTTTCTTTGGGGATCTCATGTCTCTGGTTGGAGCGTTTCTAAGTGTGACAGCTTCTATTATGCTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTTCAAGAAATTTGGGTGTGAAACCGTAGGCATAATGGGAATAATAGTAGCAGCTATAGCAATGGGAATAACTGGGACCTACACCTCTGTCGTGGAAATAGTCCACCATTTGTAA 1377 0.4023 YISNLEELRLQTSASLLQKTQTFSINLFTVFVQMSEKLSDLNVPLLYEWEHGVDEEKATASHPSPENTVSFFRTCLNGLNAISGVGILSVPYALASGGWLSLVLLLGIAAAAFYTGTLIQRCMDKNSNIRTYPDIGELAFGKMGRLIVSVSMYTELYLVSTGFLILEGDNLSNLFPIGEVQIVGFAIGGKQFFVILIALIILPTVWLDNLSLLSCVSASGVFASAVIVLSILWTATFDGVGFHQKGSALVHWNGIPTAVSLYAFCYCAHPVFPTLYNSMSNKHQFSNVLLICFLLTTLGYASMAVIGYLMFGADVESQVTLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPSTYKNRVSSILVSTVLVISTTIVALTVPFFGDLMSLVGAFLSVTASIMLPCLCYLKISGTFKKFGCETVGIMGIIVAAIAMGITGTYTSVVEIVHHL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0390 458 Pfam Transmembrane amino acid transporter protein 68 429 IPR013057 -
Aed3g0390 458 PANTHER OS05G0424000 PROTEIN-RELATED 66 455 - -
Aed3g0390 458 PANTHER AMINO ACID TRANSPORTER AVT1J 66 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0390 Aed-Chr3 2754329 2757409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0390 55 455 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.701 2.41e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0390 K15015 - gmx:100794374 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0390 3 2754329 2757409 Aed3g0390 3 2754329 2757409 ECH