Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0389 ATGTCAGAAGAACTTTCCAACAAATCATCCTTGAATGTGCCTTTATTACCCGAGTGGAATAACCATGATGAGGAGAAAACCATAGCCTCTCATCATTCTACCAAAAATACTGTATCACTCTTTCGCACCTGCCTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGAGGGTGGTTAAGCTTGGTTCTTCTGTTTGCTATTGCCACTGCAGCATTTTACACAGGCATGTTGATTAAAAGATGCATGGATAAGAATTCGGATATTAGAACCTACCCTGATATTGGTGAGCTTGCATTTGGAAAGGTGGGAAGACTAATAGTATCAGTGTCCATGTACACGGAGCTCTACTTGGTTTCAACAGGGTTCTTGATTCTGGAAGGTGATAACTTGAGTAACTTATTCCCCATTGGTGAGGTTCAAATTGTTGGCTTTGCAATTGGAGGGAAGCAAGTCTTTGTAATATTGGTTGCTATTATCATCTTGCCCACAGTTTGGTTGGATAACTTGAGTCTACTTTCTTATGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGTCATCGTCTTGTCAATATTATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAAGTGCTCTTGTTCATTGGAATGGAATCCCTACAGCTGTTAGTTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCCACCTTGTACAATTCCATGTCAAACAAACATCAGTACTCTAATGTCCTACTTATATGCTTTCTGTTAACCACTTTGGGTTATGCATCCATGGCTGTAATTGGTTATCTAATGTTTGGTGCTGACGTTGAATCACAGGTCACATTAAACCTGCCACTAAACAAAGTAAGCTCAAAATTAGCCATATATACTACCTTGATCAATCCCATATCCAAGTTTGCTTTGATGGTGACACCAATTACCAATGCTTTGAAAGACTTGCTCCCAAGTACGTACATGAATAATAGAGTGAGCCGCATCTTTGTAAGCACTGTCTTGGTAATCAGCACTGCCATTGTTGCCCTCAGTGTTCCTTTCTTTGGAGATCTCATGTCCTTAGTTGGAGCGTTTTTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTACAAGAAATTTGGGTGTGAAACCGTAGGCATAATGGCAATAATAATAGTAGGTATAGTAATGGGAATATCTGGTACATACACCGCTGTCATGGAAATAGTACACCATTTGTAA 1287 0.4017 MSEELSNKSSLNVPLLPEWNNHDEEKTIASHHSTKNTVSLFRTCLNGLNAISGVGILSVPYALASGGWLSLVLLFAIATAAFYTGMLIKRCMDKNSDIRTYPDIGELAFGKVGRLIVSVSMYTELYLVSTGFLILEGDNLSNLFPIGEVQIVGFAIGGKQVFVILVAIIILPTVWLDNLSLLSYVSASGVFASAVIVLSILWTATFDGVGFHQKGSALVHWNGIPTAVSLYAFCYCAHPVFPTLYNSMSNKHQYSNVLLICFLLTTLGYASMAVIGYLMFGADVESQVTLNLPLNKVSSKLAIYTTLINPISKFALMVTPITNALKDLLPSTYMNNRVSRIFVSTVLVISTAIVALSVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYKKFGCETVGIMAIIIVGIVMGISGTYTAVMEIVHHL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0389 428 Pfam Transmembrane amino acid transporter protein 37 420 IPR013057 -
Aed3g0389 428 PANTHER OS05G0424000 PROTEIN-RELATED 33 425 - -
Aed3g0389 428 PANTHER AMINO ACID TRANSPORTER AVT1J 33 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0389 Aed-Chr3 2746032 2747517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0389 24 425 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.706 6.89e-175 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0389 K15015 - gmx:100794374 727.628