Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0371 ATGGGAAGATCACCATGCTGTGACAAGGTGGGTTTAAAGAAGGGACCATGGACGCCAGAGGAAGATCAGAAGCTATTGGCTTATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGACTTCAAAGGTGGTCGGCAATAGCCACACATTTGTCAAAGAGAACAGATAATGAAATAAAGAACTACTGGAACACTCATCTAAAGAAAAGGTTAGAGAAAATGGGGATTGACCCGGTGACCCACAAACCCAAGAACGATGCCCTTCTCTCAACCACTGAAGGCCATTCCAAGAATGCTGCCAACCTCAGCCACATGGCTCAGTGGGAGAGTGCCAGGCTCGAAGCAGAAGCAAGATTGGTCAGAGAATCAAAACTACGTAGTAGTAGTACTACTTCTGCATCATCCCCATCATCACTTTCTCTTGATCATCATGAAAGCTCCACCCATTTGGGAGAATTATACAAAGACGGCATGGAGAATTCAATGCCTTTCACGTGTAGTCTGCATGACTTGACAATGACCACCATGCCAACCACGTGGGGTTCGGCTTCTACTACTGCCGCTGCACATGCACATGCACATCTTGCTGAGGTCGACGGATTCACCAATCTTTTGCTCAATACTAACTCCGGCACCAACCGGAGTTTGTTGCCAGAGGACAATGGTAGCAGTGACAGTGGTAGTGGTGGTACCAATGCTAACTTGTACGAAGATAGCAAGAACTATTGGAACAACATTCTCAATTTGATGAATTATTCTTCTCCTTCGGATTCACCCATGTTCTGA 801 0.4632 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRWSAIATHLSKRTDNEIKNYWNTHLKKRLEKMGIDPVTHKPKNDALLSTTEGHSKNAANLSHMAQWESARLEAEARLVRESKLRSSSTTSASSPSSLSLDHHESSTHLGELYKDGMENSMPFTCSLHDLTMTTMPTTWGSASTTAAAHAHAHLAEVDGFTNLLLNTNSGTNRSLLPEDNGSSDSGSGGTNANLYEDSKNYWNNILNLMNYSSPSDSPMF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0371 266 MobiDBLite consensus disorder prediction 217 238 - -
Aed3g0371 266 Pfam Myb-like DNA-binding domain 14 72 IPR001005 -
Aed3g0371 266 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 146 261 - -
Aed3g0371 266 MobiDBLite consensus disorder prediction 127 150 - -
Aed3g0371 266 Gene3D - 11 78 - -
Aed3g0371 266 ProSiteProfiles Myb-like domain profile. 9 72 IPR001005 -
Aed3g0371 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 48 - -
Aed3g0371 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 48 131 - -
Aed3g0371 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 76 IPR017930 -
Aed3g0371 266 SUPERFAMILY Homeodomain-like 8 82 IPR009057 -
Aed3g0371 266 MobiDBLite consensus disorder prediction 129 149 - -
Aed3g0371 266 SMART sant 13 74 IPR001005 -
Aed3g0371 266 CDD SANT 16 72 IPR001005 -
Aed3g0371 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 146 261 - -
Aed3g0371 266 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 48 - -
Aed3g0371 266 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 48 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0371 Aed-Chr3 2625643 2628578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0371 1 130 MYB Transcription Factor Family AT3G01140 68.235 4.04e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed3g0371 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0371 K09422 - dcr:108211522 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0371 3 2625643 2628578 Aed3g0371 3 2625643 2628578 ECH