Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0364 ATGGCAGCTTGCATATTCACGGTGTCACAGGACGGAACCGCAGATTTCCAAACGGTGCAGGAGGCAATCGACGCCGTTCCGCTCGCCAACGTTCGCCGGACGGTGATTCGGGTCTCGCCGGGAATCTACCGGCAACCGGTTTACGTCCCCAAGACGAAGAATTTCATCACTCTCGCCGCTCTCAGCCCTGAGGACACTGTGATTACCTGGAACAACACTGCCAATGGAATCGATCACCACCAACCGTCGAGGGTGATAGGGACTGGGACTTTTGGTTGTGGAAGTACCATTTTGGAAGGGGAGGACTTTATTGCTGAGAATATTACTTTTGAGAATTCTGCGCCTGAGGGTTCAGGGCAAGCAGTTGCAGTTAGAGTAACGGCAGATCGGTGTGCCTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTACATTACGGTAAACATTATTTGAAAGATTGCTACATTGAAGGAAGTGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTAGAGCACTGTCATATCCACTGCAAGTCTGCAGGCTTCATAACTGCACAGGGCAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTAAGATGTGTTATCACAGGTAATGGAGGAAATTCATATTCATATCTTGGACGACCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCAATGTATAAGGAATGATGGCTGGGATAACTGGGGGAAAATGGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCACTCAAACGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAATCTGACCAGTTCCTCACGCATCCTTTCATTGATCCTGAACCAGAGAAACCTTGGCTTGCTCAAAGGATGGCCCTCCGGATTCCATATTCTGCCTGA 951 0.4753 MAACIFTVSQDGTADFQTVQEAIDAVPLANVRRTVIRVSPGIYRQPVYVPKTKNFITLAALSPEDTVITWNNTANGIDHHQPSRVIGTGTFGCGSTILEGEDFIAENITFENSAPEGSGQAVAVRVTADRCAFYNCRFLGWQDTLYLHYGKHYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQGRKSSQETTGYVFLRCVITGNGGNSYSYLGRPWGPFGRVVFAYTYMDQCIRNDGWDNWGKMENERSACFYEYRCFGPGCCPLKRVTWCRELLDEESDQFLTHPFIDPEPEKPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0364 316 PANTHER PECTINESTERASE 1 315 - -
Aed3g0364 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Aed3g0364 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Aed3g0364 316 SUPERFAMILY Pectin lyase-like 3 298 IPR011050 -
Aed3g0364 316 Gene3D - 3 309 IPR012334 -
Aed3g0364 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0364 Aed-Chr3 2552338 2558728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0364 5 309 Carbohydrate Esterase AT5G47500 37.898 1.19e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0364 K01051 - gmx:100786786 646.351