Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0361 ATGATAGAAGAAGGATCTGTCTTCAGTCACATGCAACTATGCAAGTGCAGTTACGCATGCACGTGCACCAGCACGAACGAACAACGTACTAAAATACATGGGGTTTGGAATCCAATTTTAGCGAAAGCATCTTGTGATATCGAAACGCACCGTCTTTTGTCGCGTATTAGCATAAATGCAAACATCGAAGGAGAACGCGATGCTTTGTTCCTCTTTTGTTCTTCGCCTTCCCAGTTTTCAACTTTAGGGTTCCTTCCCTTTAATCTCACAATTCCTCCTCACTCCCAAGCTCCATTTGTCTCTACTTTTGGAAATGAAAGCAAGCGCTTCCGATCGGAACGATGTCCATTTCCAGATTTGAAATTCTGGATTGCGTTGCGTGTGGATAAGGAAGGCTACGATTATTCTGAAATGGATGGACCAGCTGGCCGAGGTGGTGCTGGCCAGGACATGTTTCTACCCAATTATAAATTGGGCAAAACACTCGGGATCGGATCTTTTGGCAAGGTGAAAATTGCAGAACATGTATTGACTCGCCATAAGGTTGCGATCAAGATCCTTAACCGACGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGACTATTCATGCATCCTCACATTATACGACTTTATGAAGTCATAGAAACTCCAACTGACATATATGTTGTTATGGAGTATGTGAAATCTGGAGAGCTGTTTGATTACATAGTAGAGAAGGGTAGGTTGCAGGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAACATGGTGGTTCATAGAGATTTGAAGCCTGAGAATCTACTTTTGGACTCCAAATGTAGTGTCAAGATTGCCGATTTTGGCTTGAGCAACATCATGCGTGATGGTCACTTTCTTAAAACAAGTTGTGGAAGCCCTAACTATGCAGCTCCTGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATATGCCCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAATCTCTTCAAGAAAATAAAGGGCGGAATATACACTCTTCCCAGTCATCTATCACCCGGTGCTAGAGATTTGATACCAGGGATGCTTGTGGTTGACCCTATGAGGAGAATGACCATACCTGAGATCCGTCAACACCCATGGTTTCAAGCCCGACTTCCACGTTATTTAGCGGTGCCACCACCAGATACAATGCAACAGGCCAAAAAGATTGACGAGGAGATCCTTCAGGAAGTTGTGAAAATGAGTTTTGACAGGAATCAACTGGTTGAATCTCTTCGGAACAGGATACAAAATGAGGGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGGATTCCGGTTTTAATCAAATGCATTCCAGTGAACTTGCTTCTTCAGCTGTTGGAAACCGCTTTCCAGGCTATATGGAGTATCCAGGAGTAGGATTGAGGCAACAGTTCCCTGTTGAAAGGAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTTTGCAAGAATTAAATGTTTGTTGGAAGAAGATTGGTCACTACAACATGAAGTGTAGGTGGGTTGCTGGCATTCCAGGTCATCACGAAGGAATGGTTAACAATAATGTGCATAATAATCATTACTTTGGAGATGATTCCAACATTATTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAATTTGAAGTGCAGCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGGGTCCACAGTTTCTTTTCTTGGATCTGTGTGCTGCTTTCCTTGCACAGCTTCGTGTCCTCTAG 1956 0.4274 MIEEGSVFSHMQLCKCSYACTCTSTNEQRTKIHGVWNPILAKASCDIETHRLLSRISINANIEGERDALFLFCSSPSQFSTLGFLPFNLTIPPHSQAPFVSTFGNESKRFRSERCPFPDLKFWIALRVDKEGYDYSEMDGPAGRGGAGQDMFLPNYKLGKTLGIGSFGKVKIAEHVLTRHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCSVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPGMLVVDPMRRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEILQEVVKMSFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNQMHSSELASSAVGNRFPGYMEYPGVGLRQQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGHHEGMVNNNVHNNHYFGDDSNIIENDAVSTSNVVKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0361 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Aed3g0361 651 PANTHER SERINE/THREONINE KINASE 145 650 - -
Aed3g0361 651 CDD AMPKA_C 526 648 - -
Aed3g0361 651 SMART uba_6 431 468 IPR015940 -
Aed3g0361 651 Pfam UBA/TS-N domain 430 466 IPR015940 -
Aed3g0361 651 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524
Aed3g0361 651 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 602 650 IPR001772 -
Aed3g0361 651 SUPERFAMILY Protein kinase-like (PK-like) 153 426 IPR011009 -
Aed3g0361 651 CDD UBA_SnRK1_plant 430 470 - -
Aed3g0361 651 CDD STKc_AMPK_alpha 153 408 - -
Aed3g0361 651 ProSiteProfiles Protein kinase domain profile. 156 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0361 651 SUPERFAMILY KA1-like 465 650 IPR028375 -
Aed3g0361 651 Pfam Kinase associated domain 1 608 650 IPR001772 -
Aed3g0361 651 Pfam Protein kinase domain 156 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0361 651 SMART serkin_6 156 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0361 651 Gene3D Transferase(Phosphotransferase) domain 1 147 487 - -
Aed3g0361 651 Gene3D Kinase associated domain 1, KA1 532 649 - -
Aed3g0361 651 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 429 469 IPR015940 -
Aed3g0361 651 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 145 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0361 Aed-Chr3 2524690 2532769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0361 156 408 CBL-interacting serine-threonine protein kinases AT4G24400 51.575 1.09e-88 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Aed3g0361 Pkinase 1.5e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0361 K07198 - gmx:100796687 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0361 3 2524690 2532769 Aed3g0361 3 2524690 2532769 ECH