Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0358 ATGTCCACTCCCAACACCGATTCAGGCACGGCGCCGCCACCGCGCCCCACCATCACGCTCCCCCCGCGTCCCTCCGCCGAGGCCTTCTTCTCCGCCGGCGGCGGCGCCAGCCCCGGCCCCATGACCCTCGTCTCCAGCTTCTTCGGCTCCGAAGCCGCTGGCGACTGCCGCTCCTTCTCGCAGCTCCTCGCCGGCGCCATGGCCTCCCCGATGGCCTTCTCCGCCGCCGACAACTCCGGCAGGGACGACGATGGGCCCCACAAGGGGGTTCAAGCAGAGCAGACCCATGAATTTGGTCATTGCTCGTTCTCCTGTCTTCACTGTGCCACCCGGCTTGAGCCCTTCTGGCTTTCTCAACTCCCCTGGCTTCTTTTCCCCTCAGGGTGTTATGGCAAACAACAGAAAATTGAGGCAGAATTTGCGGCTGAAATACAATCTAGCCCCTTTGGGATGTCCCATCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTTGCTCAATCTCATATGCATATGCAAGCTGATTACCAGATGCCATCAGTAACAGCTCCCACCGAACCACCTGTACAGCAGCCATCTTTTGCTCTAAATGAAGCTTCTGAGCAGCAAATGGTATCATCTGTATCAGAACCTAGACATGCTCAACCCGATACATCGGAGCTCTCACAGGCTGATAAAAAATATCAACCATCTTCCCAGGCCATTGACAAACCTGCAGATGATGGCTTCAACTGGCGTAAGTATGGGCAGAAGCAGGTCAAGGGCAGTGAGTATCCGCGAAGCTATTACAAGTGCACACATCTGAATTGCATTGTGAAGAAAAAAGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGGCAAATAGGCGTGCCAAAGATAGTAGTGATTCAAATGGAAATGTAACTGTTCAGCCCAAGTCTGAGTCAAACTCACAAGGTTGGGTTGGACAATTAAACAAGTTTAGTGAAAACATTCCCGATTCTTCAGTTCCTGAAAGTGACCAGACCTCCAATCAAGGGGCTCCTAGGCAACTACTACCCGGGCCAAGTGAGAGTGAGGAAGTGGGTGATGTAGAAAATAGGGAAGAGGCAGATGACAGCGAGCCAAACCCTAAGAGAAGGCAAAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTGGATCTTTTGGATGATGGCTACAGGTGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAACCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGCAACGTGCGTAAGCATGTTGAGAGAGCTTCAACAGACCCCAAAGCTGTCATAACCACGTATGAGGGTAAACATAATCATGATGTGCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTAACAATTCAATGCCATTAAAACCGCATAATGTCGTGCCGGAGAAGCATCCTTTGCTTAAAGATATGGATTTTGGAGGTAATAATGATCAAAGACCTGTACATTTGCGCTTAAAAGAAGAGCAAATCATAGTATAA 1572 0.4994 MSTPNTDSGTAPPPRPTITLPPRPSAEAFFSAGGGASPGPMTLVSSFFGSEAAGDCRSFSQLLAGAMASPMAFSAADNSGRDDDGPHKGVQAEQTHEFGHCSFSCLHCATRLEPFWLSQLPWLLFPSGCYGKQQKIEAEFAAEIQSSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQMPSVTAPTEPPVQQPSFALNEASEQQMVSSVSEPRHAQPDTSELSQADKKYQPSSQAIDKPADDGFNWRKYGQKQVKGSEYPRSYYKCTHLNCIVKKKVERAPDGHITEIIYKGQHNHEKPQANRRAKDSSDSNGNVTVQPKSESNSQGWVGQLNKFSENIPDSSVPESDQTSNQGAPRQLLPGPSESEEVGDVENREEADDSEPNPKRRQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASNNSMPLKPHNVVPEKHPLLKDMDFGGNNDQRPVHLRLKEEQIIV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0358 523 MobiDBLite consensus disorder prediction 199 246 - -
Aed3g0358 523 MobiDBLite consensus disorder prediction 464 486 - -
Aed3g0358 523 MobiDBLite consensus disorder prediction 199 231 - -
Aed3g0358 523 MobiDBLite consensus disorder prediction 379 393 - -
Aed3g0358 523 SUPERFAMILY WRKY DNA-binding domain 239 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 MobiDBLite consensus disorder prediction 289 305 - -
Aed3g0358 523 MobiDBLite consensus disorder prediction 470 486 - -
Aed3g0358 523 ProSiteProfiles WRKY domain profile. 235 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 521 IPR044810 GO:0003700
Aed3g0358 523 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 PANTHER WRKY TRANSCRIPTION FACTOR 73 9 521 - -
Aed3g0358 523 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 SMART WRKY_cls 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 Gene3D WRKY domain 225 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 Gene3D WRKY domain 393 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0358 523 MobiDBLite consensus disorder prediction 306 359 - -
Aed3g0358 523 MobiDBLite consensus disorder prediction 289 395 - -
Aed3g0358 523 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0358 Aed-Chr3 2505122 2508675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0358 15 521 WRKY Transcription Factor Family AT2G03340 46.481 1.96e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g0358 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0358 - - gmx:100796679 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0358 3 2505122 2508675 Aed3g0358 3 2505122 2508675 ECH