Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0352 ATGCTTATGGCTTCTCGTGATGCCATCAAATCAGCCAAACAATGCTCAGAGAAAGAGAACCATGTGGTGCCACAAAGAGGAGAAGACACTGACATTATCCTCTCTGCCATGGTTCTCGGTTCCAACGTGGTCTTTCCCGCAGCTTTGAACGCTGCAATTGAGCTCAACGTGTTTGAGATCATTGCAAAGGAAAGCTCAGAAGAGAGTGGTGGATTCATGCTTGAGCGTTTGTTGCGCCTGCTTGCTAGCTACTCTCTTCTCACTGTTTCCACTCGCACCAATGAGGAGGATGGTAGCACCGTGAGAGTTTATGGCATCTCGCCATCGGGTAAATATTTCGTCTGTGATGAAAATGGTGGTGGCTATCTCGCCTCATTCACTTCGTTTCTGTGCCACCGTGCATTATCCGGGGTGTGGTAA 420 0.4857 MLMASRDAIKSAKQCSEKENHVVPQRGEDTDIILSAMVLGSNVVFPAALNAAIELNVFEIIAKESSEESGGFMLERLLRLLASYSLLTVSTRTNEEDGSTVRVYGISPSGKYFVCDENGGGYLASFTSFLCHRALSGVW 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0352 139 PANTHER O-METHYLTRANSFERASE 14 139 IPR016461 GO:0008168
Aed3g0352 139 Gene3D - 12 69 IPR036388 -
Aed3g0352 139 Gene3D - 70 113 IPR036388 -
Aed3g0352 139 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 139 - -
Aed3g0352 139 SUPERFAMILY "Winged helix" DNA-binding domain 30 117 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0352 Aed-Chr3 2483118 2483842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0352 28 139 Monolignol Biosynthesis Gene Families AT1G33030 33.071 3.87e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0352 - - gmx:100798295 176.792