Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0344 TATTTGCACGACACGAAGTGGACTTTGCGCCTGAGAGTGTTGAAGATAACACGAAACGAAACGAAAACTCATCATTTAGTTGCTATCCATTTTTTTCATTTTTCTTCCCACCGATGTCCACTCCCAACACCGATTCAGGCACGGCGCCGCCACCGCGCCCCCACCATCACGCTCCCCCCGCGTCCCTCCGCCGAGGCCTTCTTCTCCGCCGGCGGCGGCGCCAGCCCCGGCCCCATGACCCTCGTCTCCAGCTTCTTCGGCTCCGAAGCCGCTGGCGACTGCCGCTCCTTCTCGCAGCTCCTCGCCGGCGCCATGGCCTCCCCGATGGCCTTCTCCGCCGCCGACAACTCCGGCAGGGACGACGATGGGCCCCACAAGGGGTTCAAGCAGAGCAGACCCATGAATTTGGTCATTGCTCGTTCTCCTGTCTTCACTGTGCCACCCGGCTTGAGCCCTTCTGGCTTTCTCAACTCCCCTGGCTTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCCCATCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTTGCTCAATCTCATATGCATATGCAAGCTGATTACCAGATGCCATCAGTAACAGCTCCCACCGAACCACCTGTACAGCAGCCATCTTTTGCTCTAAATGAAGCTTCTGAGCAGCAAATGGTATCATCTGTATCAGAACCTAGACATGCTCAACCCGATACATCGGAGCTCTCACAGGCTGATAAAAAATATCAACCATCTTCCCAGGCCATTGACAAACCTGCAGATGATGGCTTCAACTGGCGTAAGTATGGGCAGAAGCAGGTCAAGGGCAGTGAGTATCCGCGAAGCTATTACAAGTGCACACATCTGAATTGCATTGTGAAGAAAAAGTTGAGCGTGCCCCTGATGCATAACCATGAAAAGCCTCAGGCAAATAGGCGTGCCAAAGATAGTAGTGATTCAAATGGAAATGTAACTGTTCAGCCCAAGTCTGAGTCAAACTCACAAGGTTGGGTTGGACAATTAAACAAGTTTAGTGAAAACATTCCCGATTCTTCAGTTCCTGAAAGTGACCAGACCTCCAATCAAGGGGCTCCTAGGCAACTACTACCCGGGCCAAGTGAGAGTGAGGAAGTGGGTGATGTAGAAAATAGGGAAGAGGCAGATGACAGCGAGCCAAACCCTAAGAGAAGGCAAGCTAAATTTCTGTTTTTCAGGAACACTGATGTTGCGGTTTCTGAAGTACCTCTGTCTCAGAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTGGATCTTTTGGATGATGGCTACAGGTGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAACCCTCATCCAAGAATGTCACTTTCTCTAATTGTATATTGTACATTCACTTTAATTGATTATAAATGGGAACAAATGTACGCAGTAGATAATCATAACTTGAGGATTCAAGTTTTGTTCTTCAATCCTGCAACATCCTTACGATGTGGGTTGGCTATCGGTTTGACCTTATTGTCAAGATTCAGCCCTCTCCAACATGTCCCCAACCCTCCTGCGAGTTATTACAAATGCACTAGTGCAGGATGCAACGTGCGTAAGCATGTTGAGAGAGCTTCAACAGACCCCAAAGCTGTCATAACCACGTATGAGGGTAAACATAATCATGATGTGCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTAACAATTCAATGCCATTAAAACCGCATAATGTCGTGCCGGAGAAGCATCCTTTGCTTAAAGATATGGATTTTGGAGGTAATAATGATCAAAGACCTGTACATTTGCGCTTAAAAGAAGAGCAAATCATACCGTCCCCACGTGGGACAAGGCTTAGGCTTGTTTGTTGTTACCTTGTAAACTTATATTGTTCAAATTTGATTCAATTAAGGTAG 1935 0.4811 YLHDTKWTLRLRVLKITRNETKTHHLVAIHFFHFSSHRCPLPTPIQARRRHRAPTITLPPRPSAEAFFSAGGGASPGPMTLVSSFFGSEAAGDCRSFSQLLAGAMASPMAFSAADNSGRDDDGPHKGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQMPSVTAPTEPPVQQPSFALNEASEQQMVSSVSEPRHAQPDTSELSQADKKYQPSSQAIDKPADDGFNWRKYGQKQVKGSEYPRSYYKCTHLNCIVKKKLSVPLMHNHEKPQANRRAKDSSDSNGNVTVQPKSESNSQGWVGQLNKFSENIPDSSVPESDQTSNQGAPRQLLPGPSESEEVGDVENREEADDSEPNPKRRQAKFLFFRNTDVAVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRMSLSLIVYCTFTLIDYKWEQMYAVDNHNLRIQVLFFNPATSLRCGLAIGLTLLSRFSPLQHVPNPPASYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASNNSMPLKPHNVVPEKHPLLKDMDFGGNNDQRPVHLRLKEEQIIPSPRGTRLRLVCCYLVNLYCSNLIQLR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0344 644 Gene3D WRKY domain 423 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 Gene3D WRKY domain 247 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 523 616 IPR044810 GO:0003700
Aed3g0344 644 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 458 IPR044810 GO:0003700
Aed3g0344 644 Gene3D WRKY domain 512 564 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 PANTHER WRKY TRANSCRIPTION FACTOR 73 523 616 - -
Aed3g0344 644 PANTHER WRKY TRANSCRIPTION FACTOR 73 48 458 - -
Aed3g0344 644 MobiDBLite consensus disorder prediction 304 395 - -
Aed3g0344 644 MobiDBLite consensus disorder prediction 560 581 - -
Aed3g0344 644 SUPERFAMILY WRKY DNA-binding domain 428 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 MobiDBLite consensus disorder prediction 314 367 - -
Aed3g0344 644 SUPERFAMILY WRKY DNA-binding domain 522 563 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 MobiDBLite consensus disorder prediction 565 581 - -
Aed3g0344 644 Pfam WRKY DNA -binding domain 523 560 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 Pfam WRKY DNA -binding domain 260 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 Pfam WRKY DNA -binding domain 437 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 MobiDBLite consensus disorder prediction 218 265 - -
Aed3g0344 644 ProSiteProfiles WRKY domain profile. 254 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 MobiDBLite consensus disorder prediction 218 250 - -
Aed3g0344 644 ProSiteProfiles WRKY domain profile. 431 563 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 SMART WRKY_cls 259 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 SMART WRKY_cls 436 562 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0344 644 SUPERFAMILY WRKY DNA-binding domain 258 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0344 Aed-Chr3 2457970 2462101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0344 521 617 WRKY Transcription Factor Family AT2G03340 59.596 3.34e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g0344 WRKY 4.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0344 - - gmx:100796679 704.131