Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0340 ATGAGTTCATATTCCTCAGGCTCAGAGAAAGAGAACCATGTGGTGCCACAAAGAGGAGAAGACACTGACATTATCCTCTCTGCCATGGTTCTCGGTTCCAACGTGGTCTTTCCCGCAGCTTTGAACGCTGCAATTGAGCTCAACGTGTTTGAGATCATTGCAAAGGAAAGCTCAGAAGAGAGTGGTGGATTCATGTCACCCCATGAAATTGCTTCCAAGTTATTATTACCAACACAGCAGCAACACCATTCTGACTTGCCGAATAGGCTTGAGCGTTTGTTGCGCCTGCTTGCTAGCTACTCTCTTCTCACTGTTTCCACTCGCACCAATGAGGAGGATGGTAGCACCGTGAGAGTTTATGGCATCTCGCCATCGGGTAAATATTTCGTCTGTGATGAAAATGGTGGTGGCTATCTCGCCTCATTCACTTCGTTTCTGTGCCACCGTGCATTATCCGGGGTGTGGATGAATTTTAAGGAAGCGGTTATTGATCCTGAGATTGACCTATTCAAGAAGATTCATGGAATGTCTAAGTTCGAGTACTTTGGGAAAGAACCAGAACTAAACCACGTATTTAACAAAGCAATGAATGATATATGCACAACCCATATGAAAAAAATACTCCAAGTATACACAGGATATGAGGGCATATCAACTTTGGTTGATGTAGGAGGTGGAACTGGACAATGTCTCAAATTGATCATCTCCAAATACCCTTCAATTAAGGGGATTAATTTTGACCTCCCACATGTCATTCAAAACTCACCATCCATTCCAGGGGTTGAGCATATTGGGGGGAATATGTTTGAAGGTGTTCCACATGGTGATGCCATAATGCTAAAGGCTATATGCCATAATTGGTCGGATGAAAAGGCCATAGAAATTTTAAGCAATTGTCATAAAGCTTTGCCACAAAACGGGAAGGTCATTGTGGGAGATTTCATACTGCCGGAAGATCCAGAACCTACAAATGATTATAAAGTAATTTCAATTCTTGATATCATCATGTTTATCACACCTGGTGGAATGGAAAGAACTGAGAAACAATTTGAGAGTTTGGGCAAGCATGCTGGATTTTCTAGGTTTCAAGTTGTTTGCCGTGCTTTTTCTACTATGACAGTGATGGAATTTTACAAGTAA 1140 0.4202 MSSYSSGSEKENHVVPQRGEDTDIILSAMVLGSNVVFPAALNAAIELNVFEIIAKESSEESGGFMSPHEIASKLLLPTQQQHHSDLPNRLERLLRLLASYSLLTVSTRTNEEDGSTVRVYGISPSGKYFVCDENGGGYLASFTSFLCHRALSGVWMNFKEAVIDPEIDLFKKIHGMSKFEYFGKEPELNHVFNKAMNDICTTHMKKILQVYTGYEGISTLVDVGGGTGQCLKLIISKYPSIKGINFDLPHVIQNSPSIPGVEHIGGNMFEGVPHGDAIMLKAICHNWSDEKAIEILSNCHKALPQNGKVIVGDFILPEDPEPTNDYKVISILDIIMFITPGGMERTEKQFESLGKHAGFSRFQVVCRAFSTMTVMEFYK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0340 379 Pfam Dimerisation domain 40 98 IPR012967 GO:0046983
Aed3g0340 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 379 IPR016461 GO:0008168
Aed3g0340 379 PANTHER O-METHYLTRANSFERASE 1 379 IPR016461 GO:0008168
Aed3g0340 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 377 IPR029063 -
Aed3g0340 379 Pfam O-methyltransferase domain 155 360 IPR001077 GO:0008171
Aed3g0340 379 Gene3D Vaccinia Virus protein VP39 132 379 IPR029063 -
Aed3g0340 379 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 379 - -
Aed3g0340 379 PIRSF O-mtase 6 379 IPR016461 GO:0008168
Aed3g0340 379 CDD AdoMet_MTases 219 316 - -
Aed3g0340 379 Gene3D - 4 129 IPR036388 -
Aed3g0340 379 SUPERFAMILY "Winged helix" DNA-binding domain 22 133 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0340 Aed-Chr3 2436338 2437979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0340 7 369 Monolignol Biosynthesis Gene Families AT5G54160 48.352 3.24e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0340 - - gmx:100798295 641.343