Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0337 ATGCCCAACACCTTCTCCTCTCTTCTTCGGTGGATTGGCAAAAGGTTGCCACGAAGGAACTCAATTAGCAATGGAGACAGCGGCAGCGACAGCAGCTTCCACAACGCTGCCGCCGTAGAAGATGACAATCCGTTTAGCAGCGGGGTGGAGTGTTACGCCTGCACGCAGGTAGGCGTGCCGGTGTTTCACTCCACCAGCTGTGACAGCGCCCTCCACCAGCTACAGTGGGAGGCTTCGGCTGGGTCTTCTCTGGTTCCCATCCAGAACCGGCCCAACAAGGTCCTCGGCTTTCGGACCGTGTCCGGTTCGAACCGAGGGCCGTTCGGGCGTGTTTTGGATCCGCGGAGCAAGCGCGTGCAGAGGTGGAACCGTGCGTTGCTGCTGGCGCGTGGGGTAGCGCTGGCGATAGACCCGCTGTTCTTCTACGCGCTCTCGATCGGGAGGGAGGGGACGCCCTGCTTGTACATGGACGGCGGGCTGGCGGCGATGGTAACCGTGGCGCGCACGTGCGTCGACGCGGTGCACCTCTTGCACGTCTGGCTGCAGTTCAGGCTGGCGTACGTGTCGAGGGAGTCGCTGGTGGTCGGGTGCGGGAAACTCGTGTGGGACGCGCGTGAGATCGCATCGCATTATCTGCGATCGGTGAAGGGGTTCTGGTTTGACGCATTCGTGATCCTCCCAGTTCCCCAGGCTGTGTTTTGGTTGATAGTGCCAAAATTGATAAGAGAAGAGAAAATTAAAATCATTATGACAATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCATAGCATCAGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGGCCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGCGTCGCGTCATGCCTCCGGCAGCAGTGTGAGAGAACTAATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTTTGTTACCAGCAAGCGCAATAGGAGATTCATGTGGTGGAAACTCAACAGTGTTAAAAAAGCCTTTGTGCCTAGATGTTGAAGGACCTTTCAAATATGGTATCTACCAATGGGCACTTCCAGTCATATCTAGCAACTCTTTGGCTGTAAAGATTCTTTATCCCATTTTTTGGGGTTTAATGACCCTCAGCACTTTCGGGAATGATCTTGAACCCACAAGCAACTGGCTAGAAGTGATTTTCAGTATATGCATAGTACTCAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGGTGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCTGCCATGGGAGGAGAAGATGAGATGGAAATGATCAAAGATTTGCCCGAGGGCCTCAGGAGGGACATCAAGCGCCATCTTTGCTTCGATCTCATTAGAAAGGTTCCTCTATTCCACAACTTGGATGAGCTTATTCTTGACAACATTTGTGACAGGGTGAAGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGATTTTCATCGTCCGGGGACGAATAAAACGCAACCAGAGTCTGAGCAAAGGCATGGTAGCATCAAGCATCCTTGAGCCAGGAGGGTTTCTGGGGGACGAGTTACTCTCATGGTGCCTTCGAAGGCCGTTCATCGACAGACTTCCGGCCTCCTCGGCCACATTTGTGTGTCTTGAATCATCAGAAGCATTTGGGCTTGATGCTGATCACTTGAAGTACATAACAGACCACTTCAGGTACAAGTTTGCGAATGAGAGGCTGAAGAGAACAGCAAGATATTACTCATCCAATTGGAGAACATGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACCCCTGTAAGGGACAATAATGGAGGAAGCACTGAACGCAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2148 0.5028 MPNTFSSLLRWIGKRLPRRNSISNGDSGSDSSFHNAAAVEDDNPFSSGVECYACTQVGVPVFHSTSCDSALHQLQWEASAGSSLVPIQNRPNKVLGFRTVSGSNRGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYALSIGREGTPCLYMDGGLAAMVTVARTCVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDAREIASHYLRSVKGFWFDAFVILPVPQAVFWLIVPKLIREEKIKIIMTIMLLIFLFQFLPKVYHSISMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEICYQSLLPASAIGDSCGGNSTVLKKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCFDLIRKVPLFHNLDELILDNICDRVKPLVFSKDEKIIREGDPVPRMIFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESSEAFGLDADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDNNGGSTERRLLQYAAMFMSIRPHDHLE 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0337 715 ProSiteProfiles cAMP/cGMP binding motif profile. 526 605 IPR000595 -
Aed3g0337 715 SUPERFAMILY cAMP-binding domain-like 453 640 IPR018490 -
Aed3g0337 715 Gene3D - 153 449 - -
Aed3g0337 715 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 715 - -
Aed3g0337 715 Gene3D Helix hairpin bin 452 517 - -
Aed3g0337 715 CDD CAP_ED 526 633 IPR000595 -
Aed3g0337 715 SUPERFAMILY Voltage-gated potassium channels 113 447 - -
Aed3g0337 715 Pfam Ion transport protein 122 444 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed3g0337 715 Gene3D Jelly Rolls 524 642 IPR014710 -
Aed3g0337 715 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 45 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0337 Aed-Chr3 2424526 2428926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0337 42 715 Ion Channels AT5G15410 78.832 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0337 K05391 - gmx:100798823 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0337 3 2424526 2428926 Aed3g0337 3 2424526 2428926 ECH