Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0307 ATGCTTCTGCTGTCCTTCCAGATCTTGCTCACCATTCAATTCTTCTGCTGCTTCTTCACTCAGATTTTTGTGGGGTGTTCCTCATATTCAGGAACAGGAAGTAAAGAGGAGTCTGAGCCCGTGATTGGGGAGCTAGAAAGGGAGGAGAACTTGATTGCTGCAGTAAGGCATATTGTGAAGGCATTAGGGCCAAATAAGACCCTTACCAGTGATGCCAAGAAAATTCTTGCAGATCTTGGCACTAGATTGTCCTCCATGTCCATACCTAGTGAGAAGGAGGAGGGGAAACAAGGTCAAGGGGAGGATGATGGTGATGACCATAATGGTGGTGGTGATCTTTATGATGATGATGATGATGATGATGAGGGTGTTAGTGCTATTGAAGAAAGGCTTAATGTGATTCAGGAGAAAATTATGAGATGGGAGGAAGATCAGTCCATGATTTGGGATTTGGGGCCCGATGAAGCATCTGAGTATCTGAATGCTGCTAACGAAGCCCGCCGGTTGATTGAGAAGTTGGAAAGTTTGCATTTGAAGAAAGAGGATCAAGAGTACAGGTTTATGCAGAGGGCTTATAGTGTTCTTCAAACAGCTATGGCACGGCTTGAGGAAGAGTTCAGGAACTTGCTGATCCAGAACAGGCAACCTTTTGAGCCTGAATACGTCTCTTTTCGCTCCAGTGAGGAAGATGCTGTTGATGAGAACTCCATAGTCTCTTTAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCTTTTGAGGAGCATATCATTGACTTGGTTCATCCATCCGTGATCCCGGATCTCAGGTGCATTGCAAACTTGCTTTTTGCTTCTAATTATGTCCAGGAATGTTCCAATGCTTATATCATTGTCCGGAGGGATGCTTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATCGAGGACGTCTTGAAAATGGAGTGGGGTACTTTGAATTCAAAAATCAAAAGATGGATTTGGGCTGTGAAAATCTTTGTAAGGGTGTATCTTGCAAGCGAGAGGTGGCTTGGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTAGTCTAGCTTGTTTTGTTGATGCATCTAAGGCTTCGATTCTGCAGCTTCTGAATTTTGGTGAAGCCATGTCCATTGGCCCTCACCAACCTGAGAAATTGTTCCGCGTTCTTGACATGTATGAGGTTCTACAAGACCTTATGCCAGACATTGATGCTTTGTATTCAGATGAGGTTGGTTCCTCGGTTAAAATTGAATGTCATGAGGTTCTGAAGAGATTAGGCGATTGTGTGAGGGCGACATTTTTTGAATTTGAAAATGCCATTGCAACAAATGCATCATCAACTCCTTTTGTAGGTGGTGGGATACATCCTTTGATCAAATATGTTATGAATTATCTTAGAACCCTTACTGACTACAGTGACATACTCAATCTGCTTCTGAAGGACCAAGATGAGAATGCCATTTCGCTGTCACCTGACACGAGCCCTGGTAAAGAAGAAGATAGCAGAAGCCAGGGATCTCCAAGTAGAGTTTCCTCAATGGCCCTCCACTTCCGATCAATCGCTTCAATCTTGGAAAGCAACCTTGATGAGAAGTCCAAGTTATACAGAGAAGTCTCCTTGCAGCACTTGTTCTTAATGAACAACCTGCATTATATGGCTGAAAAGGTTAAGGGGTCTGAACTCAGGCTCATATATGGAGATGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCAGGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGAGGGAATTCATGCTCCGGGTTCAAATTCAGTCTCAAAAAGTCTTCTTAAAGAGAGGCTACGAAGCTTCTACCTCGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGATTATACCAGATATTCAGCTTCGTGAAGATTTGCGGATTTCTATATCTCTCAAAGTGATCCAAGCTTATAGGACGTTTGTTGGAAGGAACAATAGTCACATTAGTGACAAAAACATTAAGTACACTGCTGATGATTTAGAAAACTACCTTCTGGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCTCATAGGAGGTGA 2142 0.4309 MLLLSFQILLTIQFFCCFFTQIFVGCSSYSGTGSKEESEPVIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLGTRLSSMSIPSEKEEGKQGQGEDDGDDHNGGGDLYDDDDDDDEGVSAIEERLNVIQEKIMRWEEDQSMIWDLGPDEASEYLNAANEARRLIEKLESLHLKKEDQEYRFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDAVDENSIVSLGDESVEESLQRDSVSRAFEEHIIDLVHPSVIPDLRCIANLLFASNYVQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLGDQIFGEGEPVSLACFVDASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLQDLMPDIDALYSDEVGSSVKIECHEVLKRLGDCVRATFFEFENAIATNASSTPFVGGGIHPLIKYVMNYLRTLTDYSDILNLLLKDQDENAISLSPDTSPGKEEDSRSQGSPSRVSSMALHFRSIASILESNLDEKSKLYREVSLQHLFLMNNLHYMAEKVKGSELRLIYGDEWIRKRNWKFQQQAMKYERASWSSILNLLKDEGIHAPGSNSVSKSLLKERLRSFYLGFEDVYRIQTAWIIPDIQLREDLRISISLKVIQAYRTFVGRNNSHISDKNIKYTADDLENYLLDFFEGSQKWLQNPHRR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0307 713 Coils Coil 185 212 - -
Aed3g0307 713 Gene3D Exocyst complex component Exo70 139 708 - -
Aed3g0307 713 MobiDBLite consensus disorder prediction 499 522 - -
Aed3g0307 713 SUPERFAMILY Cullin repeat-like 144 701 IPR016159 -
Aed3g0307 713 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 707 IPR004140 GO:0000145|GO:0006887
Aed3g0307 713 Coils Coil 124 144 - -
Aed3g0307 713 Coils Coil 156 183 - -
Aed3g0307 713 MobiDBLite consensus disorder prediction 108 122 - -
Aed3g0307 713 MobiDBLite consensus disorder prediction 86 122 - -
Aed3g0307 713 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 707 - -
Aed3g0307 713 Pfam Exo70 exocyst complex subunit 332 697 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0307 Aed-Chr3 2264096 2266677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0307 44 713 EXO70 exocyst subunit family AT3G29400 48.392 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0307 K07195 - gmx:100799102 1210.67