Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0299 ATGGCTTCCAATAATGGCCGTAAAGCAAGTGAGATTTTTGAAGGTCAACATCTCTTATACAGACACATGTATGCCCATGTAGACTCTATGATTCTTAAATGTATCGTTCAGCTTGGAATACCAGACATAATCCACAACCACGGTCAACCCATTACACTTCCAAAATTGGTGTCAATTCTACAAGTTCCACCGAATAAAGTTAGTGGCTTGCAGAGTCTCATGAGTTATCTAGCACACAATGGATTCTTTGAGATAGTAAGAATCCATGACAACAACAACAACAACATAGAAGAAAAGGAATTAGCATATGCTCTAACTGCTGCATCAGAGCTTCTTGTCAAAGGCAGTGACCTTTGTTTAGCACCAATGGTTGAGTGTTTTCTTGACCCAACTTTTTCAAGCTCATGGCATCATTTGAAGAAGTGGATTTATGAGGATGATCTCACACTATTTGGTATCTCCTTAGGGTCACACTTGTGGGACTTTCTTGATAAAAATCCTGCATTTAACAAATCAGTCAATGAGGCAATGGCTAGTGATTCTCAGATGATGAATTTGGCGTTGAGAGATTGCAATTGGGTCTTTGAAGGACTGGAATCCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCCAAAATTATCTGTGAGGCATTTCCTAACTTGAAATGCAGAGTGTTGGAACTTCCACATGTTATAGAGAACTTGTCAGGAAGCAACAATTTGACATATGTTGCTGGGGACATGTTTAAATCTATTCCCAATGCTGATGCATGGATACTACATGATTGGAATGACAGCGATTGCAGAAAGATATTAAAAAATTGTAAGGAAGCTATTTCGAGTAAAAGCAAAAGAGGAAAAGTAATTGTTATAGATGTTGTCATAAACGAAAATCAAGATGAACATGAAGTTACTAGACTAAAGCTTCTTATGAATGTACACATGACATGCCTTATCAATGGAAAAGAGAGACGTGAAGAAGAGTGGAAGAAACTTTTCGTGGAAGCAGGGCTTCAAAGCTACAAAATATCTCCTTTAACAGGACATTTGTCTCTTATTGAGATTTATCCTTGA 1077 0.3816 MASNNGRKASEIFEGQHLLYRHMYAHVDSMILKCIVQLGIPDIIHNHGQPITLPKLVSILQVPPNKVSGLQSLMSYLAHNGFFEIVRIHDNNNNNIEEKELAYALTAASELLVKGSDLCLAPMVECFLDPTFSSSWHHLKKWIYEDDLTLFGISLGSHLWDFLDKNPAFNKSVNEAMASDSQMMNLALRDCNWVFEGLESIVDVGGGTGTTAKIICEAFPNLKCRVLELPHVIENLSGSNNLTYVAGDMFKSIPNADAWILHDWNDSDCRKILKNCKEAISSKSKRGKVIVIDVVINENQDEHEVTRLKLLMNVHMTCLINGKERREEEWKKLFVEAGLQSYKISPLTGHLSLIEIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0299 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Aed3g0299 358 PANTHER O-METHYLTRANSFERASE 2 357 IPR016461 GO:0008168
Aed3g0299 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 356 IPR029063 -
Aed3g0299 358 Gene3D - 1 112 IPR036388 -
Aed3g0299 358 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 357 - -
Aed3g0299 358 Pfam O-methyltransferase domain 136 339 IPR001077 GO:0008171
Aed3g0299 358 Gene3D Vaccinia Virus protein VP39 113 358 IPR029063 -
Aed3g0299 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 116 IPR036390 -
Aed3g0299 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
Aed3g0299 358 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0299 Aed-Chr3 2197166 2198543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0299 25 356 Monolignol Biosynthesis Gene Families AT5G54160 31.487 2.07e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0299 K22588 - gmx:100811609 628.632