Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0298 ATGGCTTCTTCTTCAATGAATGGCCGTAATGCAAGTGAGATCTTTCAAGGTCAAGCACTATTGTACAAACATTTGCTTGCCTTCATAGATTCTAAGTGTCTCAAATTGATGGTTGAGCTTGACATACCAGACATCATCCACAAGCATGGCCAACCCATTACTTTTTTAGAGTTGGTGTCAATTCTACAAGTTCCATCAACAAAAATTGGTCACGTGCAGAGTTTCATGTGCTACCTGGCACACCAAGGATTCTTTGAAAGAGTAAGAATTCATGAAAAAGAAATATATGCTCTCACTGCTGCCTCAGAGCTACTTCTCAAAAGCAGTGAGGTTTGTTTAGTTCCAGCGGTTGAGCATTTTCTGGACCCAACTGTTTCAAGTTCATGGAATCACTTGAAGAAGTGGGTTCATGAGGAAGATCTCACACTACTTGAGGTCTCCACAGGATCAACTTTGTGGAACTTTCTTAACAAAGACTCTGCATTTAACAAGTCATTCAATGAGACAATGGCTTGTGATTCTCAGCTGATGAACTTGGCATTGAGAAATTGCAATTGGGTTTTTCAGGGACTAGAATCCATTGTGGATGTTGGTGGTGGAATTGGAACTACAGCCAACATTATCTGTGAGGTATTTCCTAACTTGAAATGTATAGTGTTAGAACGTCCACATGTTGTGGAGAACTTGTCAGGAAACAACAATTTGACTTATGTTGGTGGGGACATGTTCAAATCTATTCCCAAGGCTGATGCAGTTCTACTTAAGTTGGTTTTACATAATTGGAATGACAAGGATTGCATGAAGATATTAGAAAATTGTAAAGAAGCTATTTCAAGTAAAAGCAAAACAGGAAAAGTAGTTGTCATAGATACAGTGATAAACGAAAATGAAGAGGAGCACGAAGTTACTAGACTAAAGCTCCTTATGGATGTACACATGGCATGTCTTATTAATGAAAAAGAGAGAAGAGAAGAAGATTGGAAAAAACTCATATTGGAAGCAGGGTTCCAAAGCTACAAAATATCTCCTTTCACAGGATATTTGTCTCTTGTTGAGATCTATCCTTAA 1068 0.383 MASSSMNGRNASEIFQGQALLYKHLLAFIDSKCLKLMVELDIPDIIHKHGQPITFLELVSILQVPSTKIGHVQSFMCYLAHQGFFERVRIHEKEIYALTAASELLLKSSEVCLVPAVEHFLDPTVSSSWNHLKKWVHEEDLTLLEVSTGSTLWNFLNKDSAFNKSFNETMACDSQLMNLALRNCNWVFQGLESIVDVGGGIGTTANIICEVFPNLKCIVLERPHVVENLSGNNNLTYVGGDMFKSIPKADAVLLKLVLHNWNDKDCMKILENCKEAISSKSKTGKVVVIDTVINENEEEHEVTRLKLLMDVHMACLINEKERREEDWKKLILEAGFQSYKISPFTGYLSLVEIYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0298 355 Gene3D Vaccinia Virus protein VP39 106 355 IPR029063 -
Aed3g0298 355 Pfam Dimerisation domain 33 80 IPR012967 GO:0046983
Aed3g0298 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 354 - -
Aed3g0298 355 Pfam O-methyltransferase domain 129 337 IPR001077 GO:0008171
Aed3g0298 355 PANTHER O-METHYLTRANSFERASE 3 354 IPR016461 GO:0008168
Aed3g0298 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 355 IPR016461 GO:0008168
Aed3g0298 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Aed3g0298 355 SUPERFAMILY "Winged helix" DNA-binding domain 12 109 IPR036390 -
Aed3g0298 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Aed3g0298 355 Gene3D - 2 105 IPR036388 -
Aed3g0298 355 CDD AdoMet_MTases 194 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0298 Aed-Chr3 2195333 2196650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0298 1 341 Monolignol Biosynthesis Gene Families AT5G54160 28.169 1.77e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0298 K22588 - gmx:100776621 574.704