Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0290 ATGTCTGGAAAGGCTTTGAAATCCTTGAAAGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGTTCTTTGACCGCCACCGTTTCCTCACAGGCCAACGCTCTGGCACCTACATTCAGCACAGGCCTACTTCTTCAGGTGGAAGCAGTAATGAAAGCAAAGAGCTCAATGGTACAATGCAGAAAGCTAAGGCAAAGAATATGAAGACTGCTAGAGAAAAGCAACAACTCTCCACAGAATCATCCATAACTTCTTTGTCTTCATCATCTTGTTCTTCCAGCATGTCATCCCATGAGTTTAACAAAACAATTCAGATACATTCACCATCAAGAAATCGAGTCAGAATTCCAGAAAACACAAATTCAAAAGTAGCAAAGAAGCAGCCTGATACCCCGCGCCAGCAATCCCTCCATTTCCATCACATTGTCAAAGACTCAATGCATAAAGAAGCTCAAGGATTGTCCATGAAAACTGTGGCTAAAGAGGAAAAGAAGGGTCAGACTAATACCTTGAAACACATAGATTCCCCCCGGCCTTTGCGGTCACACAAATCTGTCAATGCAGGAGTTACAGTTGCCAGTGAACCTTTACAAACTCTTGCCAGGTCCAAGAAAAAACCTTGGGACTCGCCAAGACTCTCTTATGATGAAGCATTCAAATCTGCCACAAAGCATAAGGAACTCCCAAGGCTTTCTTTGGACAGCGGAGAAGGGTCCAATAGAGGTTTCAATGAAGGAAACAAGTCTCACAACCTGTTGAAGGGTTCACCGAAAGGGTACGGGAGAAACTCTAGCACAATAATCAACCAGCTGCAAGAACTAGAAACTTCCAAAAGGTCTTCCAGTGTTGTAGCTAAGTTGATGGGACTTGAAGCCTTACCTGAGTTTACACAAACTTGTGGGAGTCCAATGGGAACTTCTAGTTGCTCTACCAAAAAGAATGAGGCAATGGAAAGATCTAGCACAAGCAATGAAGACAAGCAACACCAAAGATTCACATTGCCTCAGTCTAGAAGAGCTGATTCAATCACAAACGTGACACCATATTCACGGTTTGCACTAGAACCAACTCCGTGGAGGCAACCTGATGCAAGCCAAAGCTCTCAATCTCAATCACAAGCTTCCAAGAGAATTGAATCTGATATAAAAGCCTCAAAGTCCTCTCTCACTGTGTATGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCAATGCAAAGACAAAAGGATTCGGTAGACTTTGCTAGAGATCAGGCTTCAAATTCTCCATCTGAAAGTAGGAATGGTACTAATCTCAATGAAAGCTCAAAATTACTAAGTCCAAGAGCACGACAAAAAGACCCGGCATCTGCCATGGGTGAGATGACAAATTCAACCGGGGGTAGTAAATTGCCAATTGTCATCATGAAACCTTCGAAAGTTACTAGGAAACCCAATAATCCTTCCTCTACAGAATTATCAATTCATGGTAAATCTGGTCTCAGCAAGAGTTCCTCTAGTAATCCCACATATGGAAGATTGGTTGACAAGCAAACTTCTAAAGGTATCAATTCAACAACAAAAAGTATCAAGGATCCTTTCGGTCAACAAGTTTGTTCATCAGATAGAAACAACATGAGAACTTCAAAGTTGATGCAATCCTTGAAAGTTTCTCAAGACAACAATGGAGAATGCAACACCAACACTGATTACATAACAGTGACTGGAAGCCCCAGAGTACAAAAGAGGTTTGGTTTGGAGAGGTGTTCAAGACCAACCAGTCCATCATCAGATCCCAGAATTAACAGAAGAGAGTACCATAGGCAAACTGTGGAATTGTCTTCTCCGAGTGCAACACCAATGCATAAATTCTCCACTTTGCAGCAAAGAAGCGAACGTTTCAGTGAGATCAGCTGTCACTGGAGGGATTTTAAGCATCATGTTAACATCATTTCGGATTTTGATGACAAAAGCAGCTCGGCCAGTCATAGTGACATTGAACTCATTCGCATTGATCAATCTGGAAAGATTATTAGCTCCTCCATCCATCTGAGTGGCATTAATCAAAATAATGCATTTGAAGAGTTGAGGAAGGCTGAGACCATGGTTACTGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCATTCTATAGGGATGACCCACCCTCTCCAGTGAAAAAGAAATCAGACATCTCAAAAAATTTAGGTGAAGCTCTAAGCACTGATGAAGATAGTGAAGAGAGCTCAGTGGATCTACTTCAAGAAATTGACTGGATTGATGAGAAACTCATCAATTTCAATAACACTAGAGATCCTGACCATAAATATATAGCAGAAATACTGTTAGCTTCAGGTCTGCTCAGTGGCCACAGCTCTAGCAAGATATTTCATTCACCGGGTCACTTGATTAATCCAAAGTTGTTCTTTGCACTTGAACAAATAAAGACAAAGAGGCATTTTAGCATTGAAGACAGTGCCAAGAAGATTCCCAGAATCATTAACCCTGAGCTAATGCAAAGAAAACTCATATTTGATGTTGTCAATGAAATTTTAGTTCAAAAGCTGATATTGGATAGTTCTTCTTCTGCATTGTGGTGCCAACCGAATGAGTTAACAGCAGGCACAACACTAAAAGGGAAGCAGCTTTTGAATGAGCTATGCACAGACATTGATGAGTTGCAACCTCAAAATAGGAATGCCAGTTTAGTTCATGTGGATGAGAATTTGAAGCATCACCATTCAATTTGGACTAACTGCTGCAATGAGATGCCAAATATTGTGTTGGATATTGAACGTTTGATCTTTAAAGATTTGATAACTGAGGTTGTGAGAGGTGAAGTAGCAAACCATCCTGGTACACATTGCAGGCAACTGGTGTTTTCCAAGTAG 2940 0.4122 MSGKALKSLKDENPDLQKQIGCITGFFQFFDRHRFLTGQRSGTYIQHRPTSSGGSSNESKELNGTMQKAKAKNMKTAREKQQLSTESSITSLSSSSCSSSMSSHEFNKTIQIHSPSRNRVRIPENTNSKVAKKQPDTPRQQSLHFHHIVKDSMHKEAQGLSMKTVAKEEKKGQTNTLKHIDSPRPLRSHKSVNAGVTVASEPLQTLARSKKKPWDSPRLSYDEAFKSATKHKELPRLSLDSGEGSNRGFNEGNKSHNLLKGSPKGYGRNSSTIINQLQELETSKRSSSVVAKLMGLEALPEFTQTCGSPMGTSSCSTKKNEAMERSSTSNEDKQHQRFTLPQSRRADSITNVTPYSRFALEPTPWRQPDASQSSQSQSQASKRIESDIKASKSSLTVYGEIEKRVAELEFKKSGKDLRALKQILEAMQRQKDSVDFARDQASNSPSESRNGTNLNESSKLLSPRARQKDPASAMGEMTNSTGGSKLPIVIMKPSKVTRKPNNPSSTELSIHGKSGLSKSSSSNPTYGRLVDKQTSKGINSTTKSIKDPFGQQVCSSDRNNMRTSKLMQSLKVSQDNNGECNTNTDYITVTGSPRVQKRFGLERCSRPTSPSSDPRINRREYHRQTVELSSPSATPMHKFSTLQQRSERFSEISCHWRDFKHHVNIISDFDDKSSSASHSDIELIRIDQSGKIISSSIHLSGINQNNAFEELRKAETMVTAEQPSPVSVLDAAFYRDDPPSPVKKKSDISKNLGEALSTDEDSEESSVDLLQEIDWIDEKLINFNNTRDPDHKYIAEILLASGLLSGHSSSKIFHSPGHLINPKLFFALEQIKTKRHFSIEDSAKKIPRIINPELMQRKLIFDVVNEILVQKLILDSSSSALWCQPNELTAGTTLKGKQLLNELCTDIDELQPQNRNASLVHVDENLKHHHSIWTNCCNEMPNIVLDIERLIFKDLITEVVRGEVANHPGTHCRQLVFSK 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0290 979 MobiDBLite consensus disorder prediction 41 102 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 41 70 - -
Aed3g0290 979 Pfam Domain of unknown function (DUF4378) 790 958 IPR025486 -
Aed3g0290 979 MobiDBLite consensus disorder prediction 237 270 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 341 357 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 497 525 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 305 323 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 167 188 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 243 257 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 437 461 - -
Aed3g0290 979 PANTHER LONGIFOLIA PROTEIN 767 978 - -
Aed3g0290 979 PANTHER LONGIFOLIA PROTEIN 1 769 - -
Aed3g0290 979 PANTHER LONGIFOLIA PROTEIN 767 978 IPR033334 GO:0051513
Aed3g0290 979 PANTHER LONGIFOLIA PROTEIN 1 769 IPR033334 GO:0051513
Aed3g0290 979 MobiDBLite consensus disorder prediction 167 186 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 80 102 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 431 525 - -
Aed3g0290 979 Coils Coil 66 86 - -
Aed3g0290 979 Coils Coil 420 440 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 366 384 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 303 387 - -
Aed3g0290 979 MobiDBLite consensus disorder prediction 324 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0290 Aed-Chr3 2152817 2158459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0290 143 965 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.012 6.82e-81 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0290 - - gmx:100808151 1617.05