Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0278 ATGGATACAAGTGGCACACGAATTGGTTTGGGAAGCATCCTGTTGTTGTGGCTCCCTAACCTTTCCATAGCGCATGTTATTTATCATCCCGATGAGCTCTTGAGCATCGACTGTGGCTCTTCCACCAACTCCTCCTCCGCAGATGGTCGGAACTGGATTGGAGATGATAGCAACACCAAACTCCTCCCCGATAGTTACCACTCAGTTGGTGCTCCTGCACTCACAGAAACCATGCCGGACCCTTACACCACAGCCCGTCTCTCTCGCACCCAATTCACTTACTCATTCTCTGTCACCGCAGGCCCAAAGTTTCTTCGCCTCTTTTTCTACTCAACTTCGTACCAAAACTTTGATCGCTCCAAAGCCTATTTCTCAGTCAAAGCTGGCCCATACACCCTCCTTCAAGATTTCAATGCTTCCCTCAACGCTGATGCTGCTGATGATGACCCTGACGACTTCTTGTTCAGAGAGTATTGTATCAACCTCCAAGATGGTGAAAAGAAGCTCAACATAACATTCATTCCAAGCACCGCAGATTCGTACGCTTTCATCAACGGAATCGAGATTGTCTCAATGCCCCCTTATCTCTACTACACCAATCCTGAAGACTATCCTAGATTGCCGCAATTTGTTGGCCACATGACCCAATTCTATACCATTGAAAACAACTATGCACTCCAAACAATGTATCGGTTAACCGTTGCAGGAGCATCAATCCTCCCCTCATGGGACACGGGTATGCTCAGGACCTGGGATGTCGATGACAAATACCTAACTACTCATAGTGGACCATCTGTTGATTATAACCAAAACACTAAGCTCAGCTTCACTATGATTCCTAACTACACGGCACCGGACCAAGTGTACCGAACTTTAAGGAATATGGGACAGGATCCCTCTATGAACATGAGGTTCAACCTAACATGGAAGCTTCCCGTTGCTTCTGGCTTCACCTACTTGCTAAGGTTACACTTTTGTCAGCTTAACCCGGAGGTTCACGAGCTTTCTGAGCAGATATTCTCCATCTTCATTGGTGATCAGTTGGCTGAAATAACGGCAGACATTCTCAAGTGGAGCGACAATCAGAAGGGTGTACCTGTGGTTAAAGACTACACAGTTCTCATCCCACCGAATCAGGAAATGCCATATCTATCACTAAAAATGCATCCTCACCCTAAAAGCTGGATGAAGGACGCACAACTAAACGCAATTGAACTCTTCAAAATTAACGACCCAACAGGTAATCTCGCTGAACCAAACCCAGATTCTCCCCCTTCACAGACCCCCAAGATTTCTCTAATTAGAAGTAATGGCACCAAGAGAACCCTTGCCACCGTCGCAGGTGCAGTTTCCGGTGTCGTGTTGCTCTCCTCTATCGTCGCTTTCTTCCTCATAAAACTCAGAAAGAACGTCGCTGTCAGCAAGGGTTCCAATAAAAAAGACGAAACTTCTCTCGACTGTGCCCCATCATCACTACCGACCAGCCTCTGTCCCCACTTCCCAATCAGAAAAATGATAGTTGCCACCAATAACTTCGACGAAGTCTTCAAGCTTGGTGTGGGAGGTTTCGGCAACGGTCAGATAGCACCTCAGTGTTTGCACAAATTTGTTGACGTTGCGCTGAGTTGTTTGCTTGAGGATGGGACTCAGCGGCCTTCAATGAACGATGTCGTTAGGGTGTTGGAGTTTGTTCTTCAGCTTCATGATAGTGCTGTTAATGGAGTGGAGGATAGTCGTGGGAATGGGAATTATCAAGATAGTAAACATGAACTGTATATTAGGAGCATTGAATTGTGTATGACAAGCGATGCAAATTCTTTGTGA 1824 0.4627 MDTSGTRIGLGSILLLWLPNLSIAHVIYHPDELLSIDCGSSTNSSSADGRNWIGDDSNTKLLPDSYHSVGAPALTETMPDPYTTARLSRTQFTYSFSVTAGPKFLRLFFYSTSYQNFDRSKAYFSVKAGPYTLLQDFNASLNADAADDDPDDFLFREYCINLQDGEKKLNITFIPSTADSYAFINGIEIVSMPPYLYYTNPEDYPRLPQFVGHMTQFYTIENNYALQTMYRLTVAGASILPSWDTGMLRTWDVDDKYLTTHSGPSVDYNQNTKLSFTMIPNYTAPDQVYRTLRNMGQDPSMNMRFNLTWKLPVASGFTYLLRLHFCQLNPEVHELSEQIFSIFIGDQLAEITADILKWSDNQKGVPVVKDYTVLIPPNQEMPYLSLKMHPHPKSWMKDAQLNAIELFKINDPTGNLAEPNPDSPPSQTPKISLIRSNGTKRTLATVAGAVSGVVLLSSIVAFFLIKLRKNVAVSKGSNKKDETSLDCAPSSLPTSLCPHFPIRKMIVATNNFDEVFKLGVGGFGNGQIAPQCLHKFVDVALSCLLEDGTQRPSMNDVVRVLEFVLQLHDSAVNGVEDSRGNGNYQDSKHELYIRSIELCMTSDANSL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0278 607 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 26 525 - -
Aed3g0278 607 Pfam Malectin-like domain 36 409 IPR024788 -
Aed3g0278 607 Gene3D - 31 192 - -
Aed3g0278 607 Gene3D - 224 410 - -
Aed3g0278 607 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 526 587 - -
Aed3g0278 607 PANTHER OS07G0166700 PROTEIN 26 525 IPR045272 GO:0004714|GO:0006468
Aed3g0278 607 PANTHER OS07G0166700 PROTEIN 526 587 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0278 Aed-Chr3 2062361 2064850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0278 526 571 Receptor kinase-like Gene Family AT3G51550 52.174 5.40e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0278 - - gmx:116423798 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0278 3 2062361 2064850 Aed3g0982 3 7373805 7376972 PCT