Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0265 ATGGCCCAGTCCTTCGGTCAGACAGAGATCAACTGGGACAAGCTAGATAAAACTAAGTTCTATGTAGTAGGAGCTGGACTCTTTACAGGTGTTTCGGTGGCACTTTACCCTGTTTCTGTTGTGAAAACTAGGCTGCAGGTGGCTTCAAAGGATGCTGTAGAGAGAAATGTGTTTTCTGTTGTAAAAGGACTACTTAAAACAGATGGTGTCCCTGGTTTGTATAGAGGTTTCGGCACTGTTATCACTGGTGCAATTCCTGCCAGAATCATATTCCTCTCCACTCTAGAGACCACGAAGGTGGCTGCCTTCAGAATGCTTGAACCGTTTAAACTATCTGAAACTTCCCAGGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCATCACTTTTTGCTCAGTCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAGGGGTACTCAGGCCATGCCCAATATAGTGGGACTGATGGCATCCGGGGATTGTATCGAGGGTTTGGTCTGTCTGCTATTACTTATGCACCTGCCAGTGCAGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGATTCCTGGACCATGGTGGCAAATATGATGAAGTTGCTCCTAGTCTGCAGAAAATTATGTTAGTTCAGGCTACTGGAGGGATTATTGCTGGTGCAACTTCATCCTGCATTACAACCCCATTGGATACTATCAAGACACGATTACAGGTAATGGGACATGAAAATAGAAGCTCTATAAAACAAGTTGCCAAAGATTTAATCAATGAAGATGGTTGGAGAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGCACTTCAATGATATTGACTTATGAGTATCTGAAATGCAATGAGGATGCTCTACAATAG 915 0.4383 MAQSFGQTEINWDKLDKTKFYVVGAGLFTGVSVALYPVSVVKTRLQVASKDAVERNVFSVVKGLLKTDGVPGLYRGFGTVITGAIPARIIFLSTLETTKVAAFRMLEPFKLSETSQAAIANGVAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQYSGTDGIRGLYRGFGLSAITYAPASAVWWASYGSSQRFIWRFLDHGGKYDEVAPSLQKIMLVQATGGIIAGATSSCITTPLDTIKTRLQVMGHENRSSIKQVAKDLINEDGWRGFYRGFGPRFFSMSAWGTSMILTYEYLKCNEDALQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0265 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 194 IPR018108 -
Aed3g0265 304 Gene3D Mitochondrial carrier domain 7 158 IPR023395 -
Aed3g0265 304 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 297 - -
Aed3g0265 304 SUPERFAMILY Mitochondrial carrier 13 296 IPR023395 -
Aed3g0265 304 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Aed3g0265 304 PRINTS Mitochondrial carrier protein signature 167 185 IPR002067 GO:0055085
Aed3g0265 304 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Aed3g0265 304 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 297 - -
Aed3g0265 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Aed3g0265 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 299 IPR018108 -
Aed3g0265 304 Pfam Mitochondrial carrier protein 218 297 IPR018108 -
Aed3g0265 304 Pfam Mitochondrial carrier protein 27 100 IPR018108 -
Aed3g0265 304 Pfam Mitochondrial carrier protein 119 195 IPR018108 -
Aed3g0265 304 Gene3D Mitochondrial carrier domain 159 301 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0265 Aed-Chr3 1985883 1990709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0265 10 297 Chloroplast and Mitochondria Gene Families AT5G15640 74.667 1.74e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0265 K15121 - gmx:100782750 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0265 3 1985883 1990709 Aed3g0265 3 1985883 1990709 ECH