Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0264 ATGGGCTTCTTTCTGTTACCAAAAGCAACTCCTTGCATTTTGTTCTTTGTTCTGCTATTTTGTACTTGCTTCGCTTCAACAGATGCTTATGATCCGCTTGACCCAAGTGGGAATATCACAGTCACATGGGATGTTATATCCTGGACCCCTGATGGATATGTAGCAGTTGTTACAATAAACAACTTCCAACGATATCGTCATATCACTTCACCTGGCTGGTCATTGGGATGGAGATGGGGAGAAAAGGAGGTAATATGGAGCATGGTGGGAGGGCAGACCACTGAACAAGGGGATTGTTCTAAATTTAAGGGAAATGTTCCACATTCATGCAAGAAAGATCCAACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGATGGTGTGCTCAGTTCATCGCTGCAGGATCCAACCAATTCAGTTGCATCATTTCAACTCAGTGTTGGTATTGCTGGAAACTCAAACAGAACTGTCAAAGTCCCAAAAAACTTCACCTTGAAAGCATCAGGACCAGGTTATACTTGTGGTCCAACTAGGATTGTGAGACCCACTCAATTCGTTAGCTCAGACAAAAGAAGAGTGACCCAAGCAGAGATGACATGGAAACTGGTATGCACATACTCACAATTTCTAGCTACTAAAACTCCCACTTGCTGTGTCTCACTTTCATCTTTCCATAATAATACTGTTGTCCCCTGCCCAACATGTTCTTGTGGCTGCCGAAGTAACTCAACGAGATGTATAAATCAAGGTACACCACATTTGGCCTCAGTTGTTTCTGGCTGGGGGAAGAATAATTTGTCACCTTTGGTTCAATGTACTGAGCATATGTGCCCAACTCGAGTCCACTGGCACGTTAAGTTTGATTCCAAAAAGTACTGGCATGTGAAGATTACTATTACTAATTTTAATTACAGGATGAATTATTCAGACTGGAACTTGGTTGCTCAACACCCAAACTTGGACAAGCGGACTCAAGTGCTCGGTTTCAACTACAAGTTTTTGACTCCTTATGCTTCAATAATCCAGGTACACCACATTTGGCCTCACGTGTTACTAGCTCTGGGAAGAATAATCTGTCACCTTTGGTTCAATGTACTAAACATATGTGTCCAACCCGAGTCCACTGGTCATAATGACATTCTCAACCAAGCTGGCCCTAAGGGCAATGTTGAAGCAGAACTACTCTTCCGAAAGGATAATAAAACAACTTTTACTTCTAATAAGGTTTGGGATTTTCCTCGACAGATCTATTTCAACAGTGACCCCTGTGTGATGCCACCACCTATCTAG 1317 0.4222 MGFFLLPKATPCILFFVLLFCTCFASTDAYDPLDPSGNITVTWDVISWTPDGYVAVVTINNFQRYRHITSPGWSLGWRWGEKEVIWSMVGGQTTEQGDCSKFKGNVPHSCKKDPTVVDLLPGTPYNQQIANCCKDGVLSSSLQDPTNSVASFQLSVGIAGNSNRTVKVPKNFTLKASGPGYTCGPTRIVRPTQFVSSDKRRVTQAEMTWKLVCTYSQFLATKTPTCCVSLSSFHNNTVVPCPTCSCGCRSNSTRCINQGTPHLASVVSGWGKNNLSPLVQCTEHMCPTRVHWHVKFDSKKYWHVKITITNFNYRMNYSDWNLVAQHPNLDKRTQVLGFNYKFLTPYASIIQVHHIWPHVLLALGRIICHLWFNVLNICVQPESTGHNDILNQAGPKGNVEAELLFRKDNKTTFTSNKVWDFPRQIYFNSDPCVMPPPI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0264 438 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Aed3g0264 438 PANTHER PROTEIN COBRA 6 356 IPR006918 GO:0010215|GO:0031225
Aed3g0264 438 PANTHER COBRA-LIKE PROTEIN 386 437 - -
Aed3g0264 438 PANTHER PROTEIN COBRA 386 437 IPR006918 GO:0010215|GO:0031225
Aed3g0264 438 PIRSF COBRA 3 359 IPR006918 GO:0010215|GO:0031225
Aed3g0264 438 PIRSF COBRA 383 438 IPR006918 GO:0010215|GO:0031225
Aed3g0264 438 PANTHER COBRA-LIKE PROTEIN 6 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0264 Aed-Chr3 1979929 1984073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0264 1 437 COBRA Gene Family AT3G02210 60.586 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0264 - - gmx:100783820 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0264 3 1979929 1984073 Aed3g0264 3 1979929 1984073 ECH
Aed3g0264 3 1979929 1984073 Aed3g0988 3 7415696 7420465 ECH
Aed3g0988 3 7415696 7420465 Aed3g0264 3 1979929 1984073 PCT